Protein–RNA interactions for Protein: B2RVW2

Clrn2, Clarin 2, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn2B2RVW2 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clrn2B2RVW2 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Clrn2B2RVW2 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clrn2B2RVW2 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Clrn2B2RVW2 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clrn2B2RVW2 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC14.41□□□□□ -0.1
Clrn2B2RVW2 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clrn2B2RVW2 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Clrn2B2RVW2 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Clrn2B2RVW2 Gm10176-201ENSMUST00000159707 2264 ntBASIC14.4□□□□□ -0.1
Clrn2B2RVW2 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clrn2B2RVW2 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clrn2B2RVW2 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clrn2B2RVW2 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Clrn2B2RVW2 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clrn2B2RVW2 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clrn2B2RVW2 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clrn2B2RVW2 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Clrn2B2RVW2 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clrn2B2RVW2 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC14.4□□□□□ -0.1
Clrn2B2RVW2 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC14.4□□□□□ -0.1
Clrn2B2RVW2 H2-Q3-201ENSMUST00000172583 608 ntBASIC14.4□□□□□ -0.1
Clrn2B2RVW2 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Clrn2B2RVW2 Mir6546-201ENSMUST00000184460 62 ntBASIC14.4□□□□□ -0.1
Clrn2B2RVW2 Gm5733-201ENSMUST00000190232 939 ntBASIC14.4□□□□□ -0.1
Clrn2B2RVW2 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Clrn2B2RVW2 CT009713.8-201ENSMUST00000225448 560 ntBASIC14.4□□□□□ -0.1
Clrn2B2RVW2 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC14.4□□□□□ -0.1
Clrn2B2RVW2 Gm10179-201ENSMUST00000086233 688 ntBASIC14.4□□□□□ -0.1
Clrn2B2RVW2 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clrn2B2RVW2 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clrn2B2RVW2 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clrn2B2RVW2 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC14.4□□□□□ -0.1
Clrn2B2RVW2 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clrn2B2RVW2 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Clrn2B2RVW2 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clrn2B2RVW2 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clrn2B2RVW2 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Clrn2B2RVW2 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC14.4□□□□□ -0.1
Clrn2B2RVW2 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.11
Clrn2B2RVW2 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Clrn2B2RVW2 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clrn2B2RVW2 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clrn2B2RVW2 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clrn2B2RVW2 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Clrn2B2RVW2 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clrn2B2RVW2 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clrn2B2RVW2 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Clrn2B2RVW2 Gm44999-201ENSMUST00000207456 1493 ntBASIC14.39□□□□□ -0.11
Clrn2B2RVW2 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clrn2B2RVW2 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clrn2B2RVW2 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clrn2B2RVW2 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Clrn2B2RVW2 Gm7049-201ENSMUST00000223520 1712 ntBASIC14.39□□□□□ -0.11
Clrn2B2RVW2 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clrn2B2RVW2 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC14.39□□□□□ -0.11
Clrn2B2RVW2 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC14.39□□□□□ -0.11
Clrn2B2RVW2 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clrn2B2RVW2 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Clrn2B2RVW2 Gm44551-201ENSMUST00000208804 171 ntBASIC14.39□□□□□ -0.11
Clrn2B2RVW2 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC14.39□□□□□ -0.11
Clrn2B2RVW2 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC14.39□□□□□ -0.11
Clrn2B2RVW2 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC14.39□□□□□ -0.11
Clrn2B2RVW2 Gm807-202ENSMUST00000224929 408 ntBASIC14.39□□□□□ -0.11
Clrn2B2RVW2 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clrn2B2RVW2 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clrn2B2RVW2 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clrn2B2RVW2 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clrn2B2RVW2 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Clrn2B2RVW2 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clrn2B2RVW2 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clrn2B2RVW2 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Clrn2B2RVW2 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Clrn2B2RVW2 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Clrn2B2RVW2 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clrn2B2RVW2 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clrn2B2RVW2 Gm38355-201ENSMUST00000192514 1570 ntBASIC14.39□□□□□ -0.11
Clrn2B2RVW2 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Clrn2B2RVW2 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Clrn2B2RVW2 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clrn2B2RVW2 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Clrn2B2RVW2 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clrn2B2RVW2 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Clrn2B2RVW2 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clrn2B2RVW2 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clrn2B2RVW2 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clrn2B2RVW2 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Clrn2B2RVW2 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clrn2B2RVW2 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC14.38□□□□□ -0.11
Clrn2B2RVW2 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clrn2B2RVW2 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Clrn2B2RVW2 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clrn2B2RVW2 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Clrn2B2RVW2 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clrn2B2RVW2 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clrn2B2RVW2 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Clrn2B2RVW2 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clrn2B2RVW2 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clrn2B2RVW2 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Clrn2B2RVW2 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms