Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC10.02□□□□□ -0.81
Chd6A3KFM7 Gm6370-202ENSMUST00000198912 1017 ntAPPRIS ALT2 TSL 3 BASIC10.02□□□□□ -0.81
Chd6A3KFM7 Gm45469-201ENSMUST00000210468 854 ntTSL 3 BASIC10.02□□□□□ -0.81
Chd6A3KFM7 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC10.02□□□□□ -0.81
Chd6A3KFM7 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
Chd6A3KFM7 Triap1-201ENSMUST00000031508 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Chd6A3KFM7 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Chd6A3KFM7 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Chd6A3KFM7 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Chd6A3KFM7 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Chd6A3KFM7 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC10.02□□□□□ -0.81
Chd6A3KFM7 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Chd6A3KFM7 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Chd6A3KFM7 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Chd6A3KFM7 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Chd6A3KFM7 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Chd6A3KFM7 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Chd6A3KFM7 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC10.02□□□□□ -0.81
Chd6A3KFM7 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Chd6A3KFM7 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
Chd6A3KFM7 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Chd6A3KFM7 Nnmt-202ENSMUST00000119426 912 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Chd6A3KFM7 Gm12972-201ENSMUST00000152986 1006 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Chd6A3KFM7 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC10.02□□□□□ -0.81
Chd6A3KFM7 A830092H15Rik-202ENSMUST00000195446 649 ntTSL 3 BASIC10.02□□□□□ -0.81
Chd6A3KFM7 1700017M07Rik-201ENSMUST00000198307 940 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Chd6A3KFM7 Gm45575-201ENSMUST00000210283 548 ntBASIC10.02□□□□□ -0.81
Chd6A3KFM7 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Chd6A3KFM7 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
Chd6A3KFM7 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Chd6A3KFM7 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Chd6A3KFM7 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Chd6A3KFM7 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Chd6A3KFM7 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Chd6A3KFM7 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Chd6A3KFM7 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Chd6A3KFM7 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Chd6A3KFM7 Gm15889-202ENSMUST00000212669 2443 ntBASIC10.01□□□□□ -0.81
Chd6A3KFM7 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC10.01□□□□□ -0.81
Chd6A3KFM7 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Chd6A3KFM7 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC10.01□□□□□ -0.81
Chd6A3KFM7 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Chd6A3KFM7 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Chd6A3KFM7 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Chd6A3KFM7 Gm23612-201ENSMUST00000103823 110 ntBASIC10.01□□□□□ -0.81
Chd6A3KFM7 Krt40-202ENSMUST00000107443 1080 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Chd6A3KFM7 Gm13827-201ENSMUST00000148801 372 ntBASIC10.01□□□□□ -0.81
Chd6A3KFM7 Tnnc1-202ENSMUST00000169169 721 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Chd6A3KFM7 Gm23576-201ENSMUST00000179918 110 ntBASIC10.01□□□□□ -0.81
Chd6A3KFM7 AC114645.1-201ENSMUST00000215831 187 ntBASIC10.01□□□□□ -0.81
Chd6A3KFM7 Tspo2-201ENSMUST00000024794 956 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Chd6A3KFM7 Mt4-201ENSMUST00000034207 398 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Chd6A3KFM7 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Chd6A3KFM7 Gm37269-201ENSMUST00000193906 1891 ntBASIC10.01□□□□□ -0.81
Chd6A3KFM7 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Chd6A3KFM7 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Chd6A3KFM7 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC10.01□□□□□ -0.81
Chd6A3KFM7 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC10.01□□□□□ -0.81
Chd6A3KFM7 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Chd6A3KFM7 AC139350.1-201ENSMUST00000227064 1594 ntBASIC10.01□□□□□ -0.81
Chd6A3KFM7 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Chd6A3KFM7 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Chd6A3KFM7 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Chd6A3KFM7 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Chd6A3KFM7 Pex2-201ENSMUST00000059021 1749 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Chd6A3KFM7 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Chd6A3KFM7 Gm8731-201ENSMUST00000118088 412 ntBASIC10.01□□□□□ -0.81
Chd6A3KFM7 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Chd6A3KFM7 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Chd6A3KFM7 Nudt12os-201ENSMUST00000145848 939 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Chd6A3KFM7 Gm17192-201ENSMUST00000169031 511 ntBASIC10.01□□□□□ -0.81
Chd6A3KFM7 Gm18367-201ENSMUST00000176139 600 ntBASIC10.01□□□□□ -0.81
Chd6A3KFM7 AC238811.4-201ENSMUST00000178019 1246 ntBASIC10.01□□□□□ -0.81
Chd6A3KFM7 AC238940.3-201ENSMUST00000178830 1246 ntBASIC10.01□□□□□ -0.81
Chd6A3KFM7 Gm2448-201ENSMUST00000207080 559 ntBASIC10.01□□□□□ -0.81
Chd6A3KFM7 Gm8268-201ENSMUST00000209683 458 ntBASIC10.01□□□□□ -0.81
Chd6A3KFM7 Map7-203ENSMUST00000213312 795 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Chd6A3KFM7 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Chd6A3KFM7 AC154305.4-201ENSMUST00000224520 614 ntBASIC10.01□□□□□ -0.81
Chd6A3KFM7 Crygf-201ENSMUST00000027082 627 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Chd6A3KFM7 Olfr63-201ENSMUST00000067840 955 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
Chd6A3KFM7 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Chd6A3KFM7 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Chd6A3KFM7 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Chd6A3KFM7 Gm3755-201ENSMUST00000169555 1462 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Chd6A3KFM7 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Chd6A3KFM7 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Chd6A3KFM7 Gm18626-201ENSMUST00000221512 1409 ntBASIC10.01□□□□□ -0.81
Chd6A3KFM7 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Chd6A3KFM7 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Chd6A3KFM7 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Chd6A3KFM7 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Chd6A3KFM7 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Chd6A3KFM7 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC10□□□□□ -0.81
Chd6A3KFM7 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Chd6A3KFM7 Mrps36-203ENSMUST00000109333 701 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
Chd6A3KFM7 Gm11996-201ENSMUST00000117538 915 ntBASIC10□□□□□ -0.81
Chd6A3KFM7 Gm5395-201ENSMUST00000121650 915 ntBASIC10□□□□□ -0.81
Chd6A3KFM7 Gm12756-201ENSMUST00000126294 599 ntTSL 3 BASIC10□□□□□ -0.81
Chd6A3KFM7 Gm24844-201ENSMUST00000158679 127 ntBASIC10□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 58.9 ms