Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 AC160405.1-201ENSMUST00000218207 1545 ntBASIC14.25□□□□□ -0.13
Ccdc112A0AUP1 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc112A0AUP1 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc112A0AUP1 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc112A0AUP1 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc112A0AUP1 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Ccdc112A0AUP1 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc112A0AUP1 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC14.24□□□□□ -0.13
Ccdc112A0AUP1 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc112A0AUP1 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc112A0AUP1 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc112A0AUP1 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc112A0AUP1 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc112A0AUP1 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc112A0AUP1 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc112A0AUP1 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC14.24□□□□□ -0.13
Ccdc112A0AUP1 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc112A0AUP1 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Ccdc112A0AUP1 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC14.24□□□□□ -0.13
Ccdc112A0AUP1 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc112A0AUP1 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc112A0AUP1 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Ccdc112A0AUP1 Gm15806-201ENSMUST00000120696 955 ntBASIC14.24□□□□□ -0.13
Ccdc112A0AUP1 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC14.24□□□□□ -0.13
Ccdc112A0AUP1 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC14.24□□□□□ -0.13
Ccdc112A0AUP1 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC14.24□□□□□ -0.13
Ccdc112A0AUP1 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc112A0AUP1 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc112A0AUP1 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC14.24□□□□□ -0.13
Ccdc112A0AUP1 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Ccdc112A0AUP1 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC14.24□□□□□ -0.13
Ccdc112A0AUP1 AC069562.3-201ENSMUST00000225387 587 ntBASIC14.24□□□□□ -0.13
Ccdc112A0AUP1 Gm24136-201ENSMUST00000083374 165 ntBASIC14.24□□□□□ -0.13
Ccdc112A0AUP1 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc112A0AUP1 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc112A0AUP1 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc112A0AUP1 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc112A0AUP1 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc112A0AUP1 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
Ccdc112A0AUP1 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc112A0AUP1 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc112A0AUP1 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC14.24□□□□□ -0.13
Ccdc112A0AUP1 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc112A0AUP1 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc112A0AUP1 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc112A0AUP1 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc112A0AUP1 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
Ccdc112A0AUP1 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc112A0AUP1 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Ccdc112A0AUP1 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc112A0AUP1 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc112A0AUP1 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc112A0AUP1 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc112A0AUP1 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc112A0AUP1 Gm9022-201ENSMUST00000182482 992 ntBASIC14.23□□□□□ -0.13
Ccdc112A0AUP1 Gm27847-201ENSMUST00000183711 107 ntBASIC14.23□□□□□ -0.13
Ccdc112A0AUP1 Gm27375-201ENSMUST00000183799 107 ntBASIC14.23□□□□□ -0.13
Ccdc112A0AUP1 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc112A0AUP1 Gm45059-201ENSMUST00000205558 1077 ntBASIC14.23□□□□□ -0.13
Ccdc112A0AUP1 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Ccdc112A0AUP1 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc112A0AUP1 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc112A0AUP1 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc112A0AUP1 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC14.23□□□□□ -0.13
Ccdc112A0AUP1 Gm8228-201ENSMUST00000189949 2192 ntBASIC14.23□□□□□ -0.13
Ccdc112A0AUP1 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc112A0AUP1 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc112A0AUP1 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc112A0AUP1 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc112A0AUP1 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC14.23□□□□□ -0.13
Ccdc112A0AUP1 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Ccdc112A0AUP1 CT573086.2-201ENSMUST00000227277 4992 ntBASIC14.23□□□□□ -0.13
Ccdc112A0AUP1 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc112A0AUP1 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc112A0AUP1 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Ccdc112A0AUP1 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc112A0AUP1 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc112A0AUP1 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC14.22□□□□□ -0.13
Ccdc112A0AUP1 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc112A0AUP1 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc112A0AUP1 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc112A0AUP1 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc112A0AUP1 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Ccdc112A0AUP1 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC14.22□□□□□ -0.13
Ccdc112A0AUP1 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc112A0AUP1 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Ccdc112A0AUP1 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc112A0AUP1 Gm13492-201ENSMUST00000119772 665 ntBASIC14.22□□□□□ -0.13
Ccdc112A0AUP1 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC14.22□□□□□ -0.13
Ccdc112A0AUP1 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC14.22□□□□□ -0.13
Ccdc112A0AUP1 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC14.22□□□□□ -0.13
Ccdc112A0AUP1 Gm26927-201ENSMUST00000182385 965 ntBASIC14.22□□□□□ -0.13
Ccdc112A0AUP1 Gm42442-201ENSMUST00000197951 1133 ntBASIC14.22□□□□□ -0.13
Ccdc112A0AUP1 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC14.22□□□□□ -0.13
Ccdc112A0AUP1 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc112A0AUP1 Gm7561-201ENSMUST00000211203 886 ntBASIC14.22□□□□□ -0.13
Ccdc112A0AUP1 AC167013.1-201ENSMUST00000228592 202 ntBASIC14.22□□□□□ -0.13
Ccdc112A0AUP1 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc112A0AUP1 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc112A0AUP1 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms