Protein–RNA interactions for Protein: A0A1B0GSW2

Gm28729, Predicted gene 28729, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28729A0A1B0GSW2 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm28729A0A1B0GSW2 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm28729A0A1B0GSW2 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Gm28729A0A1B0GSW2 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm28729A0A1B0GSW2 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Gm28729A0A1B0GSW2 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Gm28729A0A1B0GSW2 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC12.13□□□□□ -0.47
Gm28729A0A1B0GSW2 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm28729A0A1B0GSW2 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Gm28729A0A1B0GSW2 Gm13812-201ENSMUST00000118061 1347 ntBASIC12.13□□□□□ -0.47
Gm28729A0A1B0GSW2 Gm13810-201ENSMUST00000118584 1347 ntBASIC12.13□□□□□ -0.47
Gm28729A0A1B0GSW2 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm28729A0A1B0GSW2 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm28729A0A1B0GSW2 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm28729A0A1B0GSW2 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Gm28729A0A1B0GSW2 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Gm28729A0A1B0GSW2 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm28729A0A1B0GSW2 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Gm28729A0A1B0GSW2 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC12.13□□□□□ -0.47
Gm28729A0A1B0GSW2 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm28729A0A1B0GSW2 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm28729A0A1B0GSW2 Gm14058-201ENSMUST00000116082 735 ntBASIC12.13□□□□□ -0.47
Gm28729A0A1B0GSW2 Gm6506-201ENSMUST00000119775 1136 ntBASIC12.13□□□□□ -0.47
Gm28729A0A1B0GSW2 Gm7722-201ENSMUST00000120646 741 ntBASIC12.13□□□□□ -0.47
Gm28729A0A1B0GSW2 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC12.13□□□□□ -0.47
Gm28729A0A1B0GSW2 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC12.13□□□□□ -0.47
Gm28729A0A1B0GSW2 Gm45770-201ENSMUST00000212105 616 ntBASIC12.13□□□□□ -0.47
Gm28729A0A1B0GSW2 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm28729A0A1B0GSW2 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm28729A0A1B0GSW2 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm28729A0A1B0GSW2 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm28729A0A1B0GSW2 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Gm28729A0A1B0GSW2 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Gm28729A0A1B0GSW2 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Gm28729A0A1B0GSW2 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Gm28729A0A1B0GSW2 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm28729A0A1B0GSW2 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm28729A0A1B0GSW2 Gm45706-201ENSMUST00000213063 2136 ntBASIC12.13□□□□□ -0.47
Gm28729A0A1B0GSW2 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Gm28729A0A1B0GSW2 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Gm28729A0A1B0GSW2 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC12.12□□□□□ -0.47
Gm28729A0A1B0GSW2 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.12□□□□□ -0.47
Gm28729A0A1B0GSW2 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm28729A0A1B0GSW2 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm28729A0A1B0GSW2 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm28729A0A1B0GSW2 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Gm28729A0A1B0GSW2 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm28729A0A1B0GSW2 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm28729A0A1B0GSW2 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm28729A0A1B0GSW2 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC12.12□□□□□ -0.47
Gm28729A0A1B0GSW2 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm28729A0A1B0GSW2 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm28729A0A1B0GSW2 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm28729A0A1B0GSW2 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm28729A0A1B0GSW2 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm28729A0A1B0GSW2 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm28729A0A1B0GSW2 Gm13045-201ENSMUST00000119019 712 ntBASIC12.12□□□□□ -0.47
Gm28729A0A1B0GSW2 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC12.12□□□□□ -0.47
Gm28729A0A1B0GSW2 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC12.12□□□□□ -0.47
Gm28729A0A1B0GSW2 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Gm28729A0A1B0GSW2 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Gm28729A0A1B0GSW2 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC12.12□□□□□ -0.47
Gm28729A0A1B0GSW2 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC12.12□□□□□ -0.47
Gm28729A0A1B0GSW2 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
Gm28729A0A1B0GSW2 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC12.12□□□□□ -0.47
Gm28729A0A1B0GSW2 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm28729A0A1B0GSW2 Ntng1-201ENSMUST00000051253 327 ntBASIC12.12□□□□□ -0.47
Gm28729A0A1B0GSW2 Gm26035-201ENSMUST00000083065 308 ntBASIC12.12□□□□□ -0.47
Gm28729A0A1B0GSW2 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC12.12□□□□□ -0.47
Gm28729A0A1B0GSW2 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm28729A0A1B0GSW2 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Gm28729A0A1B0GSW2 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm28729A0A1B0GSW2 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Gm28729A0A1B0GSW2 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm28729A0A1B0GSW2 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC12.12□□□□□ -0.47
Gm28729A0A1B0GSW2 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm28729A0A1B0GSW2 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm28729A0A1B0GSW2 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm28729A0A1B0GSW2 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm28729A0A1B0GSW2 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Gm28729A0A1B0GSW2 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm28729A0A1B0GSW2 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm28729A0A1B0GSW2 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm28729A0A1B0GSW2 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm28729A0A1B0GSW2 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm28729A0A1B0GSW2 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm28729A0A1B0GSW2 Gm6198-201ENSMUST00000191337 2929 ntBASIC12.11□□□□□ -0.47
Gm28729A0A1B0GSW2 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm28729A0A1B0GSW2 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm28729A0A1B0GSW2 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm28729A0A1B0GSW2 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm28729A0A1B0GSW2 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.11□□□□□ -0.47
Gm28729A0A1B0GSW2 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm28729A0A1B0GSW2 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm28729A0A1B0GSW2 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm28729A0A1B0GSW2 Gm12165-201ENSMUST00000117047 342 ntBASIC12.11□□□□□ -0.47
Gm28729A0A1B0GSW2 Gm13035-201ENSMUST00000117496 342 ntBASIC12.11□□□□□ -0.47
Gm28729A0A1B0GSW2 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC12.11□□□□□ -0.47
Gm28729A0A1B0GSW2 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC12.11□□□□□ -0.47
Gm28729A0A1B0GSW2 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms