Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav6n-6A0A075B6B2 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav6n-6A0A075B6B2 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Trav6n-6A0A075B6B2 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav6n-6A0A075B6B2 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC9.34□□□□□ -0.91
Trav6n-6A0A075B6B2 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav6n-6A0A075B6B2 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC9.34□□□□□ -0.91
Trav6n-6A0A075B6B2 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Trav6n-6A0A075B6B2 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav6n-6A0A075B6B2 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC9.34□□□□□ -0.91
Trav6n-6A0A075B6B2 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC9.34□□□□□ -0.91
Trav6n-6A0A075B6B2 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav6n-6A0A075B6B2 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Trav6n-6A0A075B6B2 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC9.34□□□□□ -0.92
Trav6n-6A0A075B6B2 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.92
Trav6n-6A0A075B6B2 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav6n-6A0A075B6B2 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav6n-6A0A075B6B2 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav6n-6A0A075B6B2 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav6n-6A0A075B6B2 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav6n-6A0A075B6B2 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Trav6n-6A0A075B6B2 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Trav6n-6A0A075B6B2 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav6n-6A0A075B6B2 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
Trav6n-6A0A075B6B2 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav6n-6A0A075B6B2 Gm37437-201ENSMUST00000194451 1937 ntBASIC9.33□□□□□ -0.92
Trav6n-6A0A075B6B2 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav6n-6A0A075B6B2 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC9.33□□□□□ -0.92
Trav6n-6A0A075B6B2 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav6n-6A0A075B6B2 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC9.33□□□□□ -0.92
Trav6n-6A0A075B6B2 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav6n-6A0A075B6B2 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Trav6n-6A0A075B6B2 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC9.33□□□□□ -0.92
Trav6n-6A0A075B6B2 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav6n-6A0A075B6B2 Gm11478-201ENSMUST00000117851 599 ntBASIC9.33□□□□□ -0.92
Trav6n-6A0A075B6B2 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC9.33□□□□□ -0.92
Trav6n-6A0A075B6B2 Gm15376-201ENSMUST00000122258 783 ntBASIC9.33□□□□□ -0.92
Trav6n-6A0A075B6B2 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC9.33□□□□□ -0.92
Trav6n-6A0A075B6B2 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Trav6n-6A0A075B6B2 Gm9002-201ENSMUST00000178437 499 ntBASIC9.33□□□□□ -0.92
Trav6n-6A0A075B6B2 Gm28911-201ENSMUST00000188837 117 ntBASIC9.33□□□□□ -0.92
Trav6n-6A0A075B6B2 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav6n-6A0A075B6B2 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC9.33□□□□□ -0.92
Trav6n-6A0A075B6B2 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav6n-6A0A075B6B2 Gm6180-201ENSMUST00000065243 498 ntBASIC9.33□□□□□ -0.92
Trav6n-6A0A075B6B2 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
Trav6n-6A0A075B6B2 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
Trav6n-6A0A075B6B2 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Trav6n-6A0A075B6B2 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Trav6n-6A0A075B6B2 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav6n-6A0A075B6B2 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC9.33□□□□□ -0.92
Trav6n-6A0A075B6B2 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav6n-6A0A075B6B2 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav6n-6A0A075B6B2 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav6n-6A0A075B6B2 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Trav6n-6A0A075B6B2 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav6n-6A0A075B6B2 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav6n-6A0A075B6B2 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Trav6n-6A0A075B6B2 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Trav6n-6A0A075B6B2 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav6n-6A0A075B6B2 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
Trav6n-6A0A075B6B2 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
Trav6n-6A0A075B6B2 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav6n-6A0A075B6B2 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
Trav6n-6A0A075B6B2 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Trav6n-6A0A075B6B2 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav6n-6A0A075B6B2 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav6n-6A0A075B6B2 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav6n-6A0A075B6B2 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
Trav6n-6A0A075B6B2 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav6n-6A0A075B6B2 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav6n-6A0A075B6B2 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav6n-6A0A075B6B2 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Trav6n-6A0A075B6B2 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav6n-6A0A075B6B2 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav6n-6A0A075B6B2 Gm8798-201ENSMUST00000211877 1661 ntBASIC9.32□□□□□ -0.92
Trav6n-6A0A075B6B2 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav6n-6A0A075B6B2 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav6n-6A0A075B6B2 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav6n-6A0A075B6B2 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav6n-6A0A075B6B2 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav6n-6A0A075B6B2 AC153506.1-201ENSMUST00000218768 2915 ntBASIC9.32□□□□□ -0.92
Trav6n-6A0A075B6B2 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC9.32□□□□□ -0.92
Trav6n-6A0A075B6B2 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav6n-6A0A075B6B2 Gm43273-201ENSMUST00000199649 2594 ntBASIC9.32□□□□□ -0.92
Trav6n-6A0A075B6B2 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav6n-6A0A075B6B2 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav6n-6A0A075B6B2 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav6n-6A0A075B6B2 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav6n-6A0A075B6B2 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav6n-6A0A075B6B2 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav6n-6A0A075B6B2 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav6n-6A0A075B6B2 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Trav6n-6A0A075B6B2 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC9.32□□□□□ -0.92
Trav6n-6A0A075B6B2 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav6n-6A0A075B6B2 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC9.32□□□□□ -0.92
Trav6n-6A0A075B6B2 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav6n-6A0A075B6B2 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav6n-6A0A075B6B2 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC9.32□□□□□ -0.92
Trav6n-6A0A075B6B2 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 90.3 ms