Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav7n-4A0A075B620 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Trav7n-4A0A075B620 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Trav7n-4A0A075B620 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav7n-4A0A075B620 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC9.41□□□□□ -0.9
Trav7n-4A0A075B620 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Trav7n-4A0A075B620 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Trav7n-4A0A075B620 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Trav7n-4A0A075B620 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC9.41□□□□□ -0.9
Trav7n-4A0A075B620 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav7n-4A0A075B620 AC126262.1-201ENSMUST00000221802 1904 ntBASIC9.41□□□□□ -0.9
Trav7n-4A0A075B620 AC101945.2-201ENSMUST00000227886 1377 ntBASIC9.41□□□□□ -0.9
Trav7n-4A0A075B620 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC9.41□□□□□ -0.9
Trav7n-4A0A075B620 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Trav7n-4A0A075B620 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Trav7n-4A0A075B620 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav7n-4A0A075B620 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC9.41□□□□□ -0.9
Trav7n-4A0A075B620 Gm4913-201ENSMUST00000117075 1290 ntBASIC9.41□□□□□ -0.9
Trav7n-4A0A075B620 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC9.41□□□□□ -0.9
Trav7n-4A0A075B620 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav7n-4A0A075B620 Gm25144-201ENSMUST00000179561 110 ntBASIC9.41□□□□□ -0.9
Trav7n-4A0A075B620 Gm25352-201ENSMUST00000179815 110 ntBASIC9.41□□□□□ -0.9
Trav7n-4A0A075B620 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Trav7n-4A0A075B620 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC9.41□□□□□ -0.9
Trav7n-4A0A075B620 Gm10253-201ENSMUST00000194270 940 ntBASIC9.41□□□□□ -0.9
Trav7n-4A0A075B620 Gm5312-201ENSMUST00000203728 547 ntBASIC9.41□□□□□ -0.9
Trav7n-4A0A075B620 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC9.41□□□□□ -0.9
Trav7n-4A0A075B620 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC9.41□□□□□ -0.9
Trav7n-4A0A075B620 Gm5779-201ENSMUST00000218467 910 ntBASIC9.41□□□□□ -0.9
Trav7n-4A0A075B620 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav7n-4A0A075B620 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav7n-4A0A075B620 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Trav7n-4A0A075B620 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav7n-4A0A075B620 Mir339-201ENSMUST00000083659 96 ntBASIC9.41□□□□□ -0.9
Trav7n-4A0A075B620 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav7n-4A0A075B620 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Trav7n-4A0A075B620 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav7n-4A0A075B620 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav7n-4A0A075B620 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav7n-4A0A075B620 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Trav7n-4A0A075B620 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav7n-4A0A075B620 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav7n-4A0A075B620 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav7n-4A0A075B620 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav7n-4A0A075B620 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav7n-4A0A075B620 Gm44260-201ENSMUST00000204946 2094 ntBASIC9.41□□□□□ -0.9
Trav7n-4A0A075B620 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav7n-4A0A075B620 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav7n-4A0A075B620 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav7n-4A0A075B620 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC9.41□□□□□ -0.9
Trav7n-4A0A075B620 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav7n-4A0A075B620 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Trav7n-4A0A075B620 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Trav7n-4A0A075B620 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav7n-4A0A075B620 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav7n-4A0A075B620 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav7n-4A0A075B620 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav7n-4A0A075B620 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Trav7n-4A0A075B620 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Trav7n-4A0A075B620 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav7n-4A0A075B620 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Trav7n-4A0A075B620 Gm9755-201ENSMUST00000032981 1356 ntBASIC9.4□□□□□ -0.9
Trav7n-4A0A075B620 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Trav7n-4A0A075B620 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav7n-4A0A075B620 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav7n-4A0A075B620 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav7n-4A0A075B620 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Trav7n-4A0A075B620 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Trav7n-4A0A075B620 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav7n-4A0A075B620 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Trav7n-4A0A075B620 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav7n-4A0A075B620 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Trav7n-4A0A075B620 BC043934-202ENSMUST00000185694 2356 ntBASIC9.4□□□□□ -0.9
Trav7n-4A0A075B620 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC9.4□□□□□ -0.9
Trav7n-4A0A075B620 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav7n-4A0A075B620 H2af-ps-201ENSMUST00000119066 295 ntBASIC9.4□□□□□ -0.9
Trav7n-4A0A075B620 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Trav7n-4A0A075B620 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav7n-4A0A075B620 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Trav7n-4A0A075B620 Gm26464-201ENSMUST00000157094 305 ntBASIC9.4□□□□□ -0.9
Trav7n-4A0A075B620 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Trav7n-4A0A075B620 Gm43474-201ENSMUST00000196415 774 ntBASIC9.4□□□□□ -0.9
Trav7n-4A0A075B620 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Trav7n-4A0A075B620 Gm42550-201ENSMUST00000201553 960 ntBASIC9.4□□□□□ -0.9
Trav7n-4A0A075B620 AC173210.1-201ENSMUST00000222341 1131 ntBASIC9.4□□□□□ -0.9
Trav7n-4A0A075B620 AC133598.3-202ENSMUST00000224219 531 ntBASIC9.4□□□□□ -0.9
Trav7n-4A0A075B620 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC9.4□□□□□ -0.9
Trav7n-4A0A075B620 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav7n-4A0A075B620 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC9.4□□□□□ -0.9
Trav7n-4A0A075B620 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav7n-4A0A075B620 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Trav7n-4A0A075B620 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Trav7n-4A0A075B620 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav7n-4A0A075B620 Abhd6-203ENSMUST00000225234 1958 ntBASIC9.4□□□□□ -0.9
Trav7n-4A0A075B620 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav7n-4A0A075B620 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav7n-4A0A075B620 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Trav7n-4A0A075B620 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav7n-4A0A075B620 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav7n-4A0A075B620 Gm38055-201ENSMUST00000195353 2217 ntBASIC9.4□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms