Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Gm5053-201ENSMUST00000208361 1678 ntBASIC12.48□□□□□ -0.41
H2afb2S4R1M3 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
H2afb2S4R1M3 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
H2afb2S4R1M3 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
H2afb2S4R1M3 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
H2afb2S4R1M3 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
H2afb2S4R1M3 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
H2afb2S4R1M3 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC12.48□□□□□ -0.41
H2afb2S4R1M3 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC12.48□□□□□ -0.41
H2afb2S4R1M3 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC12.48□□□□□ -0.41
H2afb2S4R1M3 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
H2afb2S4R1M3 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
H2afb2S4R1M3 Gm24548-201ENSMUST00000158650 108 ntBASIC12.48□□□□□ -0.41
H2afb2S4R1M3 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC12.48□□□□□ -0.41
H2afb2S4R1M3 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC12.48□□□□□ -0.41
H2afb2S4R1M3 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC12.48□□□□□ -0.41
H2afb2S4R1M3 Gm6007-201ENSMUST00000208170 823 ntBASIC12.48□□□□□ -0.41
H2afb2S4R1M3 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC12.48□□□□□ -0.41
H2afb2S4R1M3 AC140451.2-201ENSMUST00000228030 664 ntBASIC12.48□□□□□ -0.41
H2afb2S4R1M3 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
H2afb2S4R1M3 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
H2afb2S4R1M3 Gm24136-201ENSMUST00000083374 165 ntBASIC12.48□□□□□ -0.41
H2afb2S4R1M3 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
H2afb2S4R1M3 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.48□□□□□ -0.41
H2afb2S4R1M3 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
H2afb2S4R1M3 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
H2afb2S4R1M3 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC12.48□□□□□ -0.41
H2afb2S4R1M3 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
H2afb2S4R1M3 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
H2afb2S4R1M3 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
H2afb2S4R1M3 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
H2afb2S4R1M3 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC12.48□□□□□ -0.41
H2afb2S4R1M3 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
H2afb2S4R1M3 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
H2afb2S4R1M3 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
H2afb2S4R1M3 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
H2afb2S4R1M3 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC12.48□□□□□ -0.41
H2afb2S4R1M3 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
H2afb2S4R1M3 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC12.47□□□□□ -0.41
H2afb2S4R1M3 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
H2afb2S4R1M3 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
H2afb2S4R1M3 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
H2afb2S4R1M3 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
H2afb2S4R1M3 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
H2afb2S4R1M3 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
H2afb2S4R1M3 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
H2afb2S4R1M3 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
H2afb2S4R1M3 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC12.47□□□□□ -0.41
H2afb2S4R1M3 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
H2afb2S4R1M3 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
H2afb2S4R1M3 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
H2afb2S4R1M3 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC12.47□□□□□ -0.41
H2afb2S4R1M3 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC12.47□□□□□ -0.41
H2afb2S4R1M3 Gm27514-201ENSMUST00000183692 110 ntBASIC12.47□□□□□ -0.41
H2afb2S4R1M3 Gm27243-201ENSMUST00000183964 521 ntBASIC12.47□□□□□ -0.41
H2afb2S4R1M3 Gm37008-201ENSMUST00000195712 319 ntBASIC12.47□□□□□ -0.41
H2afb2S4R1M3 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC12.47□□□□□ -0.41
H2afb2S4R1M3 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
H2afb2S4R1M3 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
H2afb2S4R1M3 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
H2afb2S4R1M3 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
H2afb2S4R1M3 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
H2afb2S4R1M3 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC12.47□□□□□ -0.41
H2afb2S4R1M3 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
H2afb2S4R1M3 Gm27177-202ENSMUST00000183514 2703 ntBASIC12.47□□□□□ -0.41
H2afb2S4R1M3 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
H2afb2S4R1M3 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
H2afb2S4R1M3 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
H2afb2S4R1M3 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC12.47□□□□□ -0.41
H2afb2S4R1M3 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
H2afb2S4R1M3 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
H2afb2S4R1M3 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC12.47□□□□□ -0.41
H2afb2S4R1M3 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
H2afb2S4R1M3 AC153366.2-201ENSMUST00000219461 1984 ntBASIC12.47□□□□□ -0.41
H2afb2S4R1M3 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
H2afb2S4R1M3 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
H2afb2S4R1M3 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
H2afb2S4R1M3 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
H2afb2S4R1M3 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.46□□□□□ -0.41
H2afb2S4R1M3 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
H2afb2S4R1M3 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
H2afb2S4R1M3 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
H2afb2S4R1M3 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
H2afb2S4R1M3 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
H2afb2S4R1M3 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
H2afb2S4R1M3 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
H2afb2S4R1M3 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC12.46□□□□□ -0.41
H2afb2S4R1M3 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
H2afb2S4R1M3 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
H2afb2S4R1M3 Gm44241-201ENSMUST00000203230 1662 ntBASIC12.46□□□□□ -0.41
H2afb2S4R1M3 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
H2afb2S4R1M3 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
H2afb2S4R1M3 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
H2afb2S4R1M3 Gm13736-201ENSMUST00000119272 253 ntBASIC12.46□□□□□ -0.41
H2afb2S4R1M3 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
H2afb2S4R1M3 Snora78-201ENSMUST00000158630 128 ntBASIC12.46□□□□□ -0.41
H2afb2S4R1M3 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
H2afb2S4R1M3 Gm5370-201ENSMUST00000187187 574 ntBASIC12.46□□□□□ -0.41
H2afb2S4R1M3 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
H2afb2S4R1M3 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms