Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smarcb1Q9Z0H3 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smarcb1Q9Z0H3 Gm43321-201ENSMUST00000198897 2409 ntBASIC12.97□□□□□ -0.33
Smarcb1Q9Z0H3 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smarcb1Q9Z0H3 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smarcb1Q9Z0H3 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smarcb1Q9Z0H3 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Smarcb1Q9Z0H3 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Smarcb1Q9Z0H3 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Smarcb1Q9Z0H3 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC12.96□□□□□ -0.33
Smarcb1Q9Z0H3 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Smarcb1Q9Z0H3 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Smarcb1Q9Z0H3 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Smarcb1Q9Z0H3 Crry-ps-201ENSMUST00000079090 1309 ntBASIC12.96□□□□□ -0.33
Smarcb1Q9Z0H3 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Smarcb1Q9Z0H3 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Smarcb1Q9Z0H3 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.33
Smarcb1Q9Z0H3 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Smarcb1Q9Z0H3 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Smarcb1Q9Z0H3 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Smarcb1Q9Z0H3 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
Smarcb1Q9Z0H3 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Smarcb1Q9Z0H3 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC12.96□□□□□ -0.33
Smarcb1Q9Z0H3 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Smarcb1Q9Z0H3 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Smarcb1Q9Z0H3 Mir7070-201ENSMUST00000183657 86 ntBASIC12.96□□□□□ -0.33
Smarcb1Q9Z0H3 Gm18827-201ENSMUST00000188341 790 ntBASIC12.96□□□□□ -0.33
Smarcb1Q9Z0H3 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC12.96□□□□□ -0.33
Smarcb1Q9Z0H3 Gm17812-201ENSMUST00000204935 318 ntBASIC12.96□□□□□ -0.33
Smarcb1Q9Z0H3 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC12.96□□□□□ -0.33
Smarcb1Q9Z0H3 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC12.96□□□□□ -0.33
Smarcb1Q9Z0H3 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC12.96□□□□□ -0.33
Smarcb1Q9Z0H3 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC12.96□□□□□ -0.33
Smarcb1Q9Z0H3 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Smarcb1Q9Z0H3 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Smarcb1Q9Z0H3 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Smarcb1Q9Z0H3 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Smarcb1Q9Z0H3 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Smarcb1Q9Z0H3 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Smarcb1Q9Z0H3 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Smarcb1Q9Z0H3 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Smarcb1Q9Z0H3 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Smarcb1Q9Z0H3 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Smarcb1Q9Z0H3 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Smarcb1Q9Z0H3 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Smarcb1Q9Z0H3 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Smarcb1Q9Z0H3 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Smarcb1Q9Z0H3 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC12.96□□□□□ -0.34
Smarcb1Q9Z0H3 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Smarcb1Q9Z0H3 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Smarcb1Q9Z0H3 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smarcb1Q9Z0H3 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
Smarcb1Q9Z0H3 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smarcb1Q9Z0H3 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smarcb1Q9Z0H3 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smarcb1Q9Z0H3 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Smarcb1Q9Z0H3 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC12.95□□□□□ -0.34
Smarcb1Q9Z0H3 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Smarcb1Q9Z0H3 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smarcb1Q9Z0H3 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Smarcb1Q9Z0H3 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smarcb1Q9Z0H3 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smarcb1Q9Z0H3 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Smarcb1Q9Z0H3 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Smarcb1Q9Z0H3 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smarcb1Q9Z0H3 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC12.95□□□□□ -0.34
Smarcb1Q9Z0H3 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Smarcb1Q9Z0H3 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC12.95□□□□□ -0.34
Smarcb1Q9Z0H3 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
Smarcb1Q9Z0H3 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC12.95□□□□□ -0.34
Smarcb1Q9Z0H3 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC12.95□□□□□ -0.34
Smarcb1Q9Z0H3 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Smarcb1Q9Z0H3 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC12.95□□□□□ -0.34
Smarcb1Q9Z0H3 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Smarcb1Q9Z0H3 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC12.95□□□□□ -0.34
Smarcb1Q9Z0H3 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Smarcb1Q9Z0H3 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smarcb1Q9Z0H3 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Smarcb1Q9Z0H3 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smarcb1Q9Z0H3 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smarcb1Q9Z0H3 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Smarcb1Q9Z0H3 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC12.95□□□□□ -0.34
Smarcb1Q9Z0H3 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
Smarcb1Q9Z0H3 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Smarcb1Q9Z0H3 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smarcb1Q9Z0H3 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smarcb1Q9Z0H3 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smarcb1Q9Z0H3 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Smarcb1Q9Z0H3 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smarcb1Q9Z0H3 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smarcb1Q9Z0H3 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smarcb1Q9Z0H3 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smarcb1Q9Z0H3 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Smarcb1Q9Z0H3 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smarcb1Q9Z0H3 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smarcb1Q9Z0H3 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Smarcb1Q9Z0H3 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC12.94□□□□□ -0.34
Smarcb1Q9Z0H3 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smarcb1Q9Z0H3 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
Smarcb1Q9Z0H3 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms