Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Clcf1Q9QZM3 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Clcf1Q9QZM3 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Clcf1Q9QZM3 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Clcf1Q9QZM3 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Clcf1Q9QZM3 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Clcf1Q9QZM3 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Clcf1Q9QZM3 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC11.36□□□□□ -0.59
Clcf1Q9QZM3 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Clcf1Q9QZM3 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Clcf1Q9QZM3 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Clcf1Q9QZM3 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Clcf1Q9QZM3 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Clcf1Q9QZM3 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC11.36□□□□□ -0.59
Clcf1Q9QZM3 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Clcf1Q9QZM3 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Clcf1Q9QZM3 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC11.36□□□□□ -0.59
Clcf1Q9QZM3 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC11.36□□□□□ -0.59
Clcf1Q9QZM3 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC11.36□□□□□ -0.59
Clcf1Q9QZM3 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Clcf1Q9QZM3 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC11.36□□□□□ -0.59
Clcf1Q9QZM3 AC132317.1-201ENSMUST00000227227 962 ntBASIC11.36□□□□□ -0.59
Clcf1Q9QZM3 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Clcf1Q9QZM3 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Clcf1Q9QZM3 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Clcf1Q9QZM3 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Clcf1Q9QZM3 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Clcf1Q9QZM3 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC11.36□□□□□ -0.59
Clcf1Q9QZM3 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Clcf1Q9QZM3 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Clcf1Q9QZM3 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Clcf1Q9QZM3 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Clcf1Q9QZM3 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Clcf1Q9QZM3 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Clcf1Q9QZM3 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Clcf1Q9QZM3 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Clcf1Q9QZM3 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC11.36□□□□□ -0.59
Clcf1Q9QZM3 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Clcf1Q9QZM3 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Clcf1Q9QZM3 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Clcf1Q9QZM3 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC11.35□□□□□ -0.59
Clcf1Q9QZM3 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Clcf1Q9QZM3 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC11.35□□□□□ -0.59
Clcf1Q9QZM3 Gm28323-201ENSMUST00000186817 2499 ntBASIC11.35□□□□□ -0.59
Clcf1Q9QZM3 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Clcf1Q9QZM3 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Clcf1Q9QZM3 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Clcf1Q9QZM3 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Clcf1Q9QZM3 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Clcf1Q9QZM3 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Clcf1Q9QZM3 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Clcf1Q9QZM3 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC11.35□□□□□ -0.59
Clcf1Q9QZM3 Gm10434-201ENSMUST00000101158 471 ntBASIC11.35□□□□□ -0.59
Clcf1Q9QZM3 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Clcf1Q9QZM3 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC11.35□□□□□ -0.59
Clcf1Q9QZM3 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Clcf1Q9QZM3 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC11.35□□□□□ -0.59
Clcf1Q9QZM3 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Clcf1Q9QZM3 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Clcf1Q9QZM3 Gm7895-201ENSMUST00000187459 1173 ntBASIC11.35□□□□□ -0.59
Clcf1Q9QZM3 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC11.35□□□□□ -0.59
Clcf1Q9QZM3 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Clcf1Q9QZM3 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC11.35□□□□□ -0.59
Clcf1Q9QZM3 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Clcf1Q9QZM3 Morn2-202ENSMUST00000227729 656 ntBASIC11.35□□□□□ -0.59
Clcf1Q9QZM3 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Clcf1Q9QZM3 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC11.35□□□□□ -0.59
Clcf1Q9QZM3 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Clcf1Q9QZM3 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Clcf1Q9QZM3 Gm17435-202ENSMUST00000212699 1998 ntBASIC11.35□□□□□ -0.59
Clcf1Q9QZM3 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC11.35□□□□□ -0.59
Clcf1Q9QZM3 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Clcf1Q9QZM3 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Clcf1Q9QZM3 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Clcf1Q9QZM3 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Clcf1Q9QZM3 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Clcf1Q9QZM3 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC11.35□□□□□ -0.59
Clcf1Q9QZM3 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Clcf1Q9QZM3 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC11.34□□□□□ -0.59
Clcf1Q9QZM3 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Clcf1Q9QZM3 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Clcf1Q9QZM3 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC11.34□□□□□ -0.59
Clcf1Q9QZM3 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Clcf1Q9QZM3 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Clcf1Q9QZM3 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
Clcf1Q9QZM3 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Clcf1Q9QZM3 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Clcf1Q9QZM3 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Clcf1Q9QZM3 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Clcf1Q9QZM3 Gm14921-201ENSMUST00000118643 908 ntBASIC11.34□□□□□ -0.59
Clcf1Q9QZM3 Gm13492-201ENSMUST00000119772 665 ntBASIC11.34□□□□□ -0.59
Clcf1Q9QZM3 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Clcf1Q9QZM3 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Clcf1Q9QZM3 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC11.34□□□□□ -0.59
Clcf1Q9QZM3 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Clcf1Q9QZM3 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC11.34□□□□□ -0.59
Clcf1Q9QZM3 Gm38092-201ENSMUST00000195600 653 ntBASIC11.34□□□□□ -0.59
Clcf1Q9QZM3 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC11.34□□□□□ -0.59
Clcf1Q9QZM3 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Clcf1Q9QZM3 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC11.34□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms