Protein–RNA interactions for Protein: Q9JM58

Crlf1, Cytokine receptor-like factor 1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf1Q9JM58 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Crlf1Q9JM58 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC10.02□□□□□ -0.81
Crlf1Q9JM58 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC10.02□□□□□ -0.81
Crlf1Q9JM58 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC10.02□□□□□ -0.81
Crlf1Q9JM58 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Crlf1Q9JM58 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Crlf1Q9JM58 Gm25201-201ENSMUST00000083093 170 ntBASIC10.02□□□□□ -0.81
Crlf1Q9JM58 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Crlf1Q9JM58 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC10.02□□□□□ -0.81
Crlf1Q9JM58 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Crlf1Q9JM58 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.81
Crlf1Q9JM58 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Crlf1Q9JM58 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Crlf1Q9JM58 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Crlf1Q9JM58 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC10.02□□□□□ -0.81
Crlf1Q9JM58 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Crlf1Q9JM58 Gm45003-201ENSMUST00000205875 2158 ntBASIC10.02□□□□□ -0.81
Crlf1Q9JM58 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Crlf1Q9JM58 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Crlf1Q9JM58 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Crlf1Q9JM58 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC10.02□□□□□ -0.81
Crlf1Q9JM58 Gm21998-201ENSMUST00000117552 1308 ntBASIC10.02□□□□□ -0.81
Crlf1Q9JM58 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Crlf1Q9JM58 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
Crlf1Q9JM58 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Crlf1Q9JM58 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Crlf1Q9JM58 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Crlf1Q9JM58 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC10.01□□□□□ -0.81
Crlf1Q9JM58 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC10.01□□□□□ -0.81
Crlf1Q9JM58 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Crlf1Q9JM58 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Crlf1Q9JM58 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Crlf1Q9JM58 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Crlf1Q9JM58 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
Crlf1Q9JM58 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Crlf1Q9JM58 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Crlf1Q9JM58 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Crlf1Q9JM58 Gm7278-201ENSMUST00000119836 1401 ntBASIC10.01□□□□□ -0.81
Crlf1Q9JM58 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Crlf1Q9JM58 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Crlf1Q9JM58 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC10.01□□□□□ -0.81
Crlf1Q9JM58 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC10.01□□□□□ -0.81
Crlf1Q9JM58 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
Crlf1Q9JM58 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC10.01□□□□□ -0.81
Crlf1Q9JM58 Gm5863-201ENSMUST00000121760 1008 ntBASIC10.01□□□□□ -0.81
Crlf1Q9JM58 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Crlf1Q9JM58 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Crlf1Q9JM58 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Crlf1Q9JM58 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Crlf1Q9JM58 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Crlf1Q9JM58 Gm37229-201ENSMUST00000191643 732 ntTSL 3 BASIC10.01□□□□□ -0.81
Crlf1Q9JM58 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Crlf1Q9JM58 Gm43778-201ENSMUST00000199438 199 ntBASIC10.01□□□□□ -0.81
Crlf1Q9JM58 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Crlf1Q9JM58 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Crlf1Q9JM58 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Crlf1Q9JM58 AC166341.2-201ENSMUST00000220571 120 ntBASIC10.01□□□□□ -0.81
Crlf1Q9JM58 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC10.01□□□□□ -0.81
Crlf1Q9JM58 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
Crlf1Q9JM58 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Crlf1Q9JM58 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Crlf1Q9JM58 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Crlf1Q9JM58 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Crlf1Q9JM58 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Crlf1Q9JM58 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Crlf1Q9JM58 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC10.01□□□□□ -0.81
Crlf1Q9JM58 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Crlf1Q9JM58 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Crlf1Q9JM58 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Crlf1Q9JM58 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Crlf1Q9JM58 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Crlf1Q9JM58 Gm42872-201ENSMUST00000200026 1967 ntBASIC10.01□□□□□ -0.81
Crlf1Q9JM58 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Crlf1Q9JM58 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Crlf1Q9JM58 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Crlf1Q9JM58 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Crlf1Q9JM58 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Crlf1Q9JM58 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
Crlf1Q9JM58 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Crlf1Q9JM58 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Crlf1Q9JM58 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC10□□□□□ -0.81
Crlf1Q9JM58 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC10□□□□□ -0.81
Crlf1Q9JM58 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Crlf1Q9JM58 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Crlf1Q9JM58 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC10□□□□□ -0.81
Crlf1Q9JM58 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Crlf1Q9JM58 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC10□□□□□ -0.81
Crlf1Q9JM58 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC10□□□□□ -0.81
Crlf1Q9JM58 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC10□□□□□ -0.81
Crlf1Q9JM58 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Crlf1Q9JM58 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC10□□□□□ -0.81
Crlf1Q9JM58 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Crlf1Q9JM58 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Crlf1Q9JM58 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Crlf1Q9JM58 Gm11470-201ENSMUST00000118868 1475 ntBASIC10□□□□□ -0.81
Crlf1Q9JM58 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Crlf1Q9JM58 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Crlf1Q9JM58 Gm43321-201ENSMUST00000198897 2409 ntBASIC10□□□□□ -0.81
Crlf1Q9JM58 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC10□□□□□ -0.81
Crlf1Q9JM58 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC10□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms