Protein–RNA interactions for Protein: Q9JIS7

Cacna1f, Voltage-dependent L-type calcium channel subunit alpha-1F, mousemouse

Predictions only

Length 1,985 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1fQ9JIS7 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC14□□□□□ -0.17
Cacna1fQ9JIS7 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cacna1fQ9JIS7 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Cacna1fQ9JIS7 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Cacna1fQ9JIS7 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Cacna1fQ9JIS7 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cacna1fQ9JIS7 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Cacna1fQ9JIS7 Vmn1r38-201ENSMUST00000226457 3462 ntAPPRIS P1 BASIC14□□□□□ -0.17
Cacna1fQ9JIS7 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cacna1fQ9JIS7 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Cacna1fQ9JIS7 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Cacna1fQ9JIS7 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cacna1fQ9JIS7 Gm14314-201ENSMUST00000118225 1015 ntBASIC14□□□□□ -0.17
Cacna1fQ9JIS7 n-R5s84-201ENSMUST00000122591 109 ntBASIC14□□□□□ -0.17
Cacna1fQ9JIS7 Mir1901-201ENSMUST00000122616 78 ntBASIC14□□□□□ -0.17
Cacna1fQ9JIS7 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC14□□□□□ -0.17
Cacna1fQ9JIS7 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC14□□□□□ -0.17
Cacna1fQ9JIS7 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Cacna1fQ9JIS7 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC14□□□□□ -0.17
Cacna1fQ9JIS7 Gm43058-201ENSMUST00000197645 625 ntBASIC14□□□□□ -0.17
Cacna1fQ9JIS7 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Cacna1fQ9JIS7 Gm9387-201ENSMUST00000098624 1320 ntBASIC14□□□□□ -0.17
Cacna1fQ9JIS7 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Cacna1fQ9JIS7 AC173482.6-201ENSMUST00000225889 1741 ntBASIC14□□□□□ -0.17
Cacna1fQ9JIS7 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cacna1fQ9JIS7 AC129931.1-201ENSMUST00000228865 1861 ntBASIC13.99□□□□□ -0.17
Cacna1fQ9JIS7 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cacna1fQ9JIS7 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cacna1fQ9JIS7 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Cacna1fQ9JIS7 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cacna1fQ9JIS7 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cacna1fQ9JIS7 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Cacna1fQ9JIS7 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cacna1fQ9JIS7 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cacna1fQ9JIS7 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cacna1fQ9JIS7 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cacna1fQ9JIS7 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cacna1fQ9JIS7 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cacna1fQ9JIS7 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cacna1fQ9JIS7 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cacna1fQ9JIS7 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cacna1fQ9JIS7 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cacna1fQ9JIS7 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cacna1fQ9JIS7 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cacna1fQ9JIS7 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cacna1fQ9JIS7 Rhox3c-202ENSMUST00000115189 648 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Cacna1fQ9JIS7 Gm15566-201ENSMUST00000121130 590 ntBASIC13.99□□□□□ -0.17
Cacna1fQ9JIS7 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC13.99□□□□□ -0.17
Cacna1fQ9JIS7 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC13.99□□□□□ -0.17
Cacna1fQ9JIS7 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC13.99□□□□□ -0.17
Cacna1fQ9JIS7 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Cacna1fQ9JIS7 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC13.99□□□□□ -0.17
Cacna1fQ9JIS7 AC124433.1-201ENSMUST00000224483 1063 ntBASIC13.99□□□□□ -0.17
Cacna1fQ9JIS7 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cacna1fQ9JIS7 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Cacna1fQ9JIS7 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cacna1fQ9JIS7 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cacna1fQ9JIS7 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Cacna1fQ9JIS7 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC13.99□□□□□ -0.17
Cacna1fQ9JIS7 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cacna1fQ9JIS7 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cacna1fQ9JIS7 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cacna1fQ9JIS7 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cacna1fQ9JIS7 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cacna1fQ9JIS7 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cacna1fQ9JIS7 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cacna1fQ9JIS7 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cacna1fQ9JIS7 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC13.98□□□□□ -0.17
Cacna1fQ9JIS7 Gm11663-201ENSMUST00000117888 290 ntBASIC13.98□□□□□ -0.17
Cacna1fQ9JIS7 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC13.98□□□□□ -0.17
Cacna1fQ9JIS7 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC13.98□□□□□ -0.17
Cacna1fQ9JIS7 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cacna1fQ9JIS7 Gm8492-201ENSMUST00000182375 987 ntBASIC13.98□□□□□ -0.17
Cacna1fQ9JIS7 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC13.98□□□□□ -0.17
Cacna1fQ9JIS7 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC13.98□□□□□ -0.17
Cacna1fQ9JIS7 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cacna1fQ9JIS7 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC13.98□□□□□ -0.17
Cacna1fQ9JIS7 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cacna1fQ9JIS7 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC13.98□□□□□ -0.17
Cacna1fQ9JIS7 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cacna1fQ9JIS7 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cacna1fQ9JIS7 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Cacna1fQ9JIS7 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cacna1fQ9JIS7 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cacna1fQ9JIS7 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cacna1fQ9JIS7 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cacna1fQ9JIS7 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cacna1fQ9JIS7 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cacna1fQ9JIS7 Gm2420-201ENSMUST00000119864 2149 ntBASIC13.98□□□□□ -0.17
Cacna1fQ9JIS7 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Cacna1fQ9JIS7 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cacna1fQ9JIS7 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cacna1fQ9JIS7 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cacna1fQ9JIS7 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cacna1fQ9JIS7 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Cacna1fQ9JIS7 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cacna1fQ9JIS7 AC126262.1-201ENSMUST00000221802 1904 ntBASIC13.98□□□□□ -0.17
Cacna1fQ9JIS7 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cacna1fQ9JIS7 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cacna1fQ9JIS7 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms