Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Gm6244-201ENSMUST00000178732 841 ntBASIC11.76□□□□□ -0.53
Trim39Q9ESN2 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC11.76□□□□□ -0.53
Trim39Q9ESN2 Gm8598-201ENSMUST00000221184 836 ntBASIC11.76□□□□□ -0.53
Trim39Q9ESN2 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim39Q9ESN2 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim39Q9ESN2 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim39Q9ESN2 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC11.76□□□□□ -0.53
Trim39Q9ESN2 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim39Q9ESN2 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim39Q9ESN2 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim39Q9ESN2 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim39Q9ESN2 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim39Q9ESN2 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim39Q9ESN2 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC11.76□□□□□ -0.53
Trim39Q9ESN2 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim39Q9ESN2 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC11.76□□□□□ -0.53
Trim39Q9ESN2 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Trim39Q9ESN2 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim39Q9ESN2 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim39Q9ESN2 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim39Q9ESN2 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim39Q9ESN2 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim39Q9ESN2 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC11.76□□□□□ -0.53
Trim39Q9ESN2 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC11.76□□□□□ -0.53
Trim39Q9ESN2 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC11.75□□□□□ -0.53
Trim39Q9ESN2 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trim39Q9ESN2 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trim39Q9ESN2 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim39Q9ESN2 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim39Q9ESN2 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Trim39Q9ESN2 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim39Q9ESN2 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim39Q9ESN2 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim39Q9ESN2 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim39Q9ESN2 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trim39Q9ESN2 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim39Q9ESN2 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim39Q9ESN2 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC11.75□□□□□ -0.53
Trim39Q9ESN2 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trim39Q9ESN2 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Trim39Q9ESN2 Gm15806-201ENSMUST00000120696 955 ntBASIC11.75□□□□□ -0.53
Trim39Q9ESN2 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trim39Q9ESN2 Gm15904-201ENSMUST00000154515 487 ntTSL 3 BASIC11.75□□□□□ -0.53
Trim39Q9ESN2 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trim39Q9ESN2 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim39Q9ESN2 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim39Q9ESN2 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trim39Q9ESN2 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trim39Q9ESN2 Gm15396-201ENSMUST00000209101 1089 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trim39Q9ESN2 Cklf-210ENSMUST00000212939 737 ntAPPRIS ALT2 TSL 3 BASIC11.75□□□□□ -0.53
Trim39Q9ESN2 AC122305.4-201ENSMUST00000216159 1206 ntBASIC11.75□□□□□ -0.53
Trim39Q9ESN2 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC11.75□□□□□ -0.53
Trim39Q9ESN2 CT009754.4-201ENSMUST00000221430 565 ntBASIC11.75□□□□□ -0.53
Trim39Q9ESN2 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim39Q9ESN2 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim39Q9ESN2 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC11.75□□□□□ -0.53
Trim39Q9ESN2 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC11.75□□□□□ -0.53
Trim39Q9ESN2 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Trim39Q9ESN2 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trim39Q9ESN2 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim39Q9ESN2 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim39Q9ESN2 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim39Q9ESN2 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim39Q9ESN2 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trim39Q9ESN2 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim39Q9ESN2 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim39Q9ESN2 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trim39Q9ESN2 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC11.75□□□□□ -0.53
Trim39Q9ESN2 Gm44806-201ENSMUST00000205574 2303 ntBASIC11.75□□□□□ -0.53
Trim39Q9ESN2 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC11.75□□□□□ -0.53
Trim39Q9ESN2 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim39Q9ESN2 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim39Q9ESN2 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trim39Q9ESN2 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC11.74□□□□□ -0.53
Trim39Q9ESN2 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim39Q9ESN2 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trim39Q9ESN2 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim39Q9ESN2 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim39Q9ESN2 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim39Q9ESN2 Gm5859-201ENSMUST00000165401 2324 ntBASIC11.74□□□□□ -0.53
Trim39Q9ESN2 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim39Q9ESN2 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim39Q9ESN2 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC11.74□□□□□ -0.53
Trim39Q9ESN2 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim39Q9ESN2 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trim39Q9ESN2 Gm9002-201ENSMUST00000178437 499 ntBASIC11.74□□□□□ -0.53
Trim39Q9ESN2 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trim39Q9ESN2 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Trim39Q9ESN2 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC11.74□□□□□ -0.53
Trim39Q9ESN2 Id2-201ENSMUST00000020974 1270 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim39Q9ESN2 Gm6458-201ENSMUST00000211573 635 ntBASIC11.74□□□□□ -0.53
Trim39Q9ESN2 Gm17794-201ENSMUST00000220252 955 ntBASIC11.74□□□□□ -0.53
Trim39Q9ESN2 AC155266.1-201ENSMUST00000220762 904 ntBASIC11.74□□□□□ -0.53
Trim39Q9ESN2 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC11.74□□□□□ -0.53
Trim39Q9ESN2 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim39Q9ESN2 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim39Q9ESN2 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Trim39Q9ESN2 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Trim39Q9ESN2 AC107452.3-201ENSMUST00000228807 1308 ntBASIC11.74□□□□□ -0.53
Trim39Q9ESN2 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms