Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Sf3a3Q9D554 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sf3a3Q9D554 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sf3a3Q9D554 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sf3a3Q9D554 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sf3a3Q9D554 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Sf3a3Q9D554 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
Sf3a3Q9D554 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
Sf3a3Q9D554 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC12.62□□□□□ -0.39
Sf3a3Q9D554 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sf3a3Q9D554 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sf3a3Q9D554 Gm3436-201ENSMUST00000179930 840 ntBASIC12.62□□□□□ -0.39
Sf3a3Q9D554 Gm38144-201ENSMUST00000192790 465 ntBASIC12.62□□□□□ -0.39
Sf3a3Q9D554 Gm18916-201ENSMUST00000198264 1246 ntBASIC12.62□□□□□ -0.39
Sf3a3Q9D554 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sf3a3Q9D554 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sf3a3Q9D554 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Sf3a3Q9D554 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sf3a3Q9D554 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sf3a3Q9D554 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sf3a3Q9D554 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sf3a3Q9D554 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sf3a3Q9D554 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sf3a3Q9D554 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sf3a3Q9D554 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sf3a3Q9D554 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sf3a3Q9D554 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Sf3a3Q9D554 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Sf3a3Q9D554 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC12.62□□□□□ -0.39
Sf3a3Q9D554 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sf3a3Q9D554 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sf3a3Q9D554 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sf3a3Q9D554 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Sf3a3Q9D554 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Sf3a3Q9D554 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sf3a3Q9D554 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sf3a3Q9D554 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Sf3a3Q9D554 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC12.61□□□□□ -0.39
Sf3a3Q9D554 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sf3a3Q9D554 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Sf3a3Q9D554 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sf3a3Q9D554 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sf3a3Q9D554 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sf3a3Q9D554 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sf3a3Q9D554 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC12.61□□□□□ -0.39
Sf3a3Q9D554 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sf3a3Q9D554 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sf3a3Q9D554 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sf3a3Q9D554 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Sf3a3Q9D554 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sf3a3Q9D554 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sf3a3Q9D554 Gm37542-201ENSMUST00000192563 2832 ntBASIC12.61□□□□□ -0.39
Sf3a3Q9D554 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sf3a3Q9D554 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC12.61□□□□□ -0.39
Sf3a3Q9D554 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC12.61□□□□□ -0.39
Sf3a3Q9D554 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Sf3a3Q9D554 Gm19184-201ENSMUST00000196798 928 ntBASIC12.61□□□□□ -0.39
Sf3a3Q9D554 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Sf3a3Q9D554 Gm44985-201ENSMUST00000206202 1016 ntBASIC12.61□□□□□ -0.39
Sf3a3Q9D554 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC12.61□□□□□ -0.39
Sf3a3Q9D554 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
Sf3a3Q9D554 AC154276.1-201ENSMUST00000228874 1299 ntBASIC12.61□□□□□ -0.39
Sf3a3Q9D554 Gm37014-201ENSMUST00000194723 2253 ntBASIC12.61□□□□□ -0.39
Sf3a3Q9D554 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sf3a3Q9D554 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sf3a3Q9D554 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC12.61□□□□□ -0.39
Sf3a3Q9D554 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sf3a3Q9D554 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sf3a3Q9D554 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sf3a3Q9D554 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Sf3a3Q9D554 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sf3a3Q9D554 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sf3a3Q9D554 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Sf3a3Q9D554 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC12.61□□□□□ -0.39
Sf3a3Q9D554 Gm43102-201ENSMUST00000201004 2324 ntBASIC12.61□□□□□ -0.39
Sf3a3Q9D554 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sf3a3Q9D554 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sf3a3Q9D554 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sf3a3Q9D554 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sf3a3Q9D554 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Sf3a3Q9D554 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
Sf3a3Q9D554 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sf3a3Q9D554 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
Sf3a3Q9D554 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Sf3a3Q9D554 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sf3a3Q9D554 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sf3a3Q9D554 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sf3a3Q9D554 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sf3a3Q9D554 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC12.6□□□□□ -0.39
Sf3a3Q9D554 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Sf3a3Q9D554 Mir449b-201ENSMUST00000104833 80 ntBASIC12.6□□□□□ -0.39
Sf3a3Q9D554 Gm4875-201ENSMUST00000118257 786 ntBASIC12.6□□□□□ -0.39
Sf3a3Q9D554 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
Sf3a3Q9D554 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sf3a3Q9D554 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC12.6□□□□□ -0.39
Sf3a3Q9D554 Gm6888-201ENSMUST00000221983 706 ntBASIC12.6□□□□□ -0.39
Sf3a3Q9D554 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sf3a3Q9D554 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sf3a3Q9D554 Gm26035-201ENSMUST00000083065 308 ntBASIC12.6□□□□□ -0.39
Sf3a3Q9D554 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms