Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim13Q9CYB0 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Trim13Q9CYB0 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim13Q9CYB0 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Trim13Q9CYB0 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim13Q9CYB0 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim13Q9CYB0 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim13Q9CYB0 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Trim13Q9CYB0 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Trim13Q9CYB0 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim13Q9CYB0 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC11.56□□□□□ -0.56
Trim13Q9CYB0 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC11.56□□□□□ -0.56
Trim13Q9CYB0 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Trim13Q9CYB0 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trim13Q9CYB0 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Trim13Q9CYB0 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim13Q9CYB0 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim13Q9CYB0 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim13Q9CYB0 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Trim13Q9CYB0 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC11.55□□□□□ -0.56
Trim13Q9CYB0 Gm2238-201ENSMUST00000192074 3669 ntBASIC11.55□□□□□ -0.56
Trim13Q9CYB0 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim13Q9CYB0 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC11.55□□□□□ -0.56
Trim13Q9CYB0 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trim13Q9CYB0 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim13Q9CYB0 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim13Q9CYB0 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim13Q9CYB0 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim13Q9CYB0 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim13Q9CYB0 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim13Q9CYB0 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim13Q9CYB0 Gm12291-201ENSMUST00000121627 311 ntBASIC11.55□□□□□ -0.56
Trim13Q9CYB0 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Trim13Q9CYB0 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC11.55□□□□□ -0.56
Trim13Q9CYB0 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trim13Q9CYB0 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trim13Q9CYB0 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC11.55□□□□□ -0.56
Trim13Q9CYB0 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC11.55□□□□□ -0.56
Trim13Q9CYB0 Gm7730-201ENSMUST00000212486 454 ntBASIC11.55□□□□□ -0.56
Trim13Q9CYB0 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC11.55□□□□□ -0.56
Trim13Q9CYB0 Itm2b-204ENSMUST00000228637 783 ntBASIC11.55□□□□□ -0.56
Trim13Q9CYB0 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim13Q9CYB0 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim13Q9CYB0 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Trim13Q9CYB0 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim13Q9CYB0 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC11.55□□□□□ -0.56
Trim13Q9CYB0 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC11.55□□□□□ -0.56
Trim13Q9CYB0 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim13Q9CYB0 Gm38273-201ENSMUST00000194987 2382 ntBASIC11.55□□□□□ -0.56
Trim13Q9CYB0 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim13Q9CYB0 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim13Q9CYB0 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Trim13Q9CYB0 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim13Q9CYB0 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim13Q9CYB0 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim13Q9CYB0 AC122840.1-201ENSMUST00000220915 3334 ntBASIC11.55□□□□□ -0.56
Trim13Q9CYB0 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC11.55□□□□□ -0.56
Trim13Q9CYB0 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim13Q9CYB0 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim13Q9CYB0 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim13Q9CYB0 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim13Q9CYB0 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Trim13Q9CYB0 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim13Q9CYB0 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim13Q9CYB0 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC11.54□□□□□ -0.56
Trim13Q9CYB0 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim13Q9CYB0 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim13Q9CYB0 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim13Q9CYB0 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC11.54□□□□□ -0.56
Trim13Q9CYB0 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim13Q9CYB0 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim13Q9CYB0 Mtf1-202ENSMUST00000106193 7554 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Trim13Q9CYB0 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC11.54□□□□□ -0.56
Trim13Q9CYB0 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim13Q9CYB0 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim13Q9CYB0 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trim13Q9CYB0 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Trim13Q9CYB0 Gm5687-201ENSMUST00000118252 640 ntBASIC11.54□□□□□ -0.56
Trim13Q9CYB0 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC11.54□□□□□ -0.56
Trim13Q9CYB0 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim13Q9CYB0 Gm16215-201ENSMUST00000161990 637 ntBASIC11.54□□□□□ -0.56
Trim13Q9CYB0 Gm44397-201ENSMUST00000195950 113 ntBASIC11.54□□□□□ -0.56
Trim13Q9CYB0 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC11.54□□□□□ -0.56
Trim13Q9CYB0 Gm45195-201ENSMUST00000205597 1008 ntBASIC11.54□□□□□ -0.56
Trim13Q9CYB0 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC11.54□□□□□ -0.56
Trim13Q9CYB0 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trim13Q9CYB0 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC11.54□□□□□ -0.56
Trim13Q9CYB0 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim13Q9CYB0 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trim13Q9CYB0 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim13Q9CYB0 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim13Q9CYB0 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim13Q9CYB0 Gm3365-201ENSMUST00000216296 1480 ntBASIC11.54□□□□□ -0.56
Trim13Q9CYB0 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim13Q9CYB0 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim13Q9CYB0 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trim13Q9CYB0 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trim13Q9CYB0 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim13Q9CYB0 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim13Q9CYB0 Gm43365-201ENSMUST00000196522 2106 ntBASIC11.54□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 65.4 ms