Protein–RNA interactions for Protein: Q9CUB6

Otud1, OTU domain-containing protein 1, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otud1Q9CUB6 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Otud1Q9CUB6 Gm14726-201ENSMUST00000120623 896 ntBASIC11.89□□□□□ -0.51
Otud1Q9CUB6 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Otud1Q9CUB6 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Otud1Q9CUB6 9430065F17Rik-202ENSMUST00000180908 1084 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Otud1Q9CUB6 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC11.89□□□□□ -0.51
Otud1Q9CUB6 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC11.89□□□□□ -0.51
Otud1Q9CUB6 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Otud1Q9CUB6 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC11.89□□□□□ -0.51
Otud1Q9CUB6 Rassf8-202ENSMUST00000058538 1131 ntBASIC11.89□□□□□ -0.51
Otud1Q9CUB6 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Otud1Q9CUB6 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Otud1Q9CUB6 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Otud1Q9CUB6 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Otud1Q9CUB6 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Otud1Q9CUB6 Gm27196-201ENSMUST00000184787 2582 ntBASIC11.89□□□□□ -0.51
Otud1Q9CUB6 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC11.89□□□□□ -0.51
Otud1Q9CUB6 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Otud1Q9CUB6 Gm8369-201ENSMUST00000079855 1374 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Otud1Q9CUB6 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Otud1Q9CUB6 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Otud1Q9CUB6 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
Otud1Q9CUB6 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Otud1Q9CUB6 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Otud1Q9CUB6 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Otud1Q9CUB6 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Otud1Q9CUB6 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Otud1Q9CUB6 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Otud1Q9CUB6 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Otud1Q9CUB6 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Otud1Q9CUB6 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Otud1Q9CUB6 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Otud1Q9CUB6 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Otud1Q9CUB6 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Otud1Q9CUB6 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Otud1Q9CUB6 Gm6210-201ENSMUST00000204734 1942 ntBASIC11.88□□□□□ -0.51
Otud1Q9CUB6 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC11.88□□□□□ -0.51
Otud1Q9CUB6 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Otud1Q9CUB6 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Otud1Q9CUB6 AC155298.2-201ENSMUST00000225485 6226 ntBASIC11.88□□□□□ -0.51
Otud1Q9CUB6 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Otud1Q9CUB6 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC11.88□□□□□ -0.51
Otud1Q9CUB6 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Otud1Q9CUB6 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Otud1Q9CUB6 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Otud1Q9CUB6 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Otud1Q9CUB6 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Otud1Q9CUB6 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Otud1Q9CUB6 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Otud1Q9CUB6 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC11.88□□□□□ -0.51
Otud1Q9CUB6 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Otud1Q9CUB6 Gm15703-201ENSMUST00000120250 880 ntBASIC11.88□□□□□ -0.51
Otud1Q9CUB6 Gm14999-201ENSMUST00000121039 624 ntBASIC11.88□□□□□ -0.51
Otud1Q9CUB6 Gm12749-201ENSMUST00000122138 1159 ntBASIC11.88□□□□□ -0.51
Otud1Q9CUB6 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC11.88□□□□□ -0.51
Otud1Q9CUB6 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Otud1Q9CUB6 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC11.88□□□□□ -0.51
Otud1Q9CUB6 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC11.88□□□□□ -0.51
Otud1Q9CUB6 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Otud1Q9CUB6 Gm4857-201ENSMUST00000192718 785 ntBASIC11.88□□□□□ -0.51
Otud1Q9CUB6 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC11.88□□□□□ -0.51
Otud1Q9CUB6 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Otud1Q9CUB6 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Otud1Q9CUB6 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Otud1Q9CUB6 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Otud1Q9CUB6 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC11.88□□□□□ -0.51
Otud1Q9CUB6 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Otud1Q9CUB6 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Otud1Q9CUB6 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Otud1Q9CUB6 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Otud1Q9CUB6 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Otud1Q9CUB6 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Otud1Q9CUB6 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Otud1Q9CUB6 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC11.88□□□□□ -0.51
Otud1Q9CUB6 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Otud1Q9CUB6 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Otud1Q9CUB6 Gm4864-201ENSMUST00000219894 1461 ntBASIC11.88□□□□□ -0.51
Otud1Q9CUB6 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
Otud1Q9CUB6 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Otud1Q9CUB6 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Otud1Q9CUB6 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Otud1Q9CUB6 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Otud1Q9CUB6 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC11.88□□□□□ -0.51
Otud1Q9CUB6 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC11.87□□□□□ -0.51
Otud1Q9CUB6 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Otud1Q9CUB6 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Otud1Q9CUB6 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Otud1Q9CUB6 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Otud1Q9CUB6 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Otud1Q9CUB6 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Otud1Q9CUB6 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Otud1Q9CUB6 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Otud1Q9CUB6 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Otud1Q9CUB6 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Otud1Q9CUB6 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Otud1Q9CUB6 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Otud1Q9CUB6 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC11.87□□□□□ -0.51
Otud1Q9CUB6 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Otud1Q9CUB6 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC11.87□□□□□ -0.51
Otud1Q9CUB6 Gm38313-201ENSMUST00000191953 1266 ntBASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms