Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smc1aQ9CU62 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Smc1aQ9CU62 n-R5s195-201ENSMUST00000082891 119 ntBASIC14.01□□□□□ -0.17
Smc1aQ9CU62 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smc1aQ9CU62 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC14.01□□□□□ -0.17
Smc1aQ9CU62 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smc1aQ9CU62 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
Smc1aQ9CU62 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Smc1aQ9CU62 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smc1aQ9CU62 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smc1aQ9CU62 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC14.01□□□□□ -0.17
Smc1aQ9CU62 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smc1aQ9CU62 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Smc1aQ9CU62 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smc1aQ9CU62 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC14□□□□□ -0.17
Smc1aQ9CU62 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC14□□□□□ -0.17
Smc1aQ9CU62 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
Smc1aQ9CU62 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC14□□□□□ -0.17
Smc1aQ9CU62 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC14□□□□□ -0.17
Smc1aQ9CU62 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Smc1aQ9CU62 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Smc1aQ9CU62 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smc1aQ9CU62 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Smc1aQ9CU62 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC14□□□□□ -0.17
Smc1aQ9CU62 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smc1aQ9CU62 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Smc1aQ9CU62 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
Smc1aQ9CU62 Gm15808-201ENSMUST00000119046 604 ntBASIC14□□□□□ -0.17
Smc1aQ9CU62 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC14□□□□□ -0.17
Smc1aQ9CU62 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC14□□□□□ -0.17
Smc1aQ9CU62 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smc1aQ9CU62 Gm38000-201ENSMUST00000192390 1215 ntBASIC14□□□□□ -0.17
Smc1aQ9CU62 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC14□□□□□ -0.17
Smc1aQ9CU62 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC14□□□□□ -0.17
Smc1aQ9CU62 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC14□□□□□ -0.17
Smc1aQ9CU62 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC14□□□□□ -0.17
Smc1aQ9CU62 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC14□□□□□ -0.17
Smc1aQ9CU62 AC093022.1-201ENSMUST00000226949 1072 ntBASIC14□□□□□ -0.17
Smc1aQ9CU62 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smc1aQ9CU62 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC14□□□□□ -0.17
Smc1aQ9CU62 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC14□□□□□ -0.17
Smc1aQ9CU62 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Smc1aQ9CU62 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smc1aQ9CU62 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC14□□□□□ -0.17
Smc1aQ9CU62 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smc1aQ9CU62 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smc1aQ9CU62 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC14□□□□□ -0.17
Smc1aQ9CU62 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smc1aQ9CU62 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smc1aQ9CU62 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Smc1aQ9CU62 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Smc1aQ9CU62 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Smc1aQ9CU62 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Smc1aQ9CU62 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smc1aQ9CU62 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smc1aQ9CU62 Gm44292-201ENSMUST00000205194 2364 ntBASIC14□□□□□ -0.17
Smc1aQ9CU62 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Smc1aQ9CU62 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Smc1aQ9CU62 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smc1aQ9CU62 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smc1aQ9CU62 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smc1aQ9CU62 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Smc1aQ9CU62 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smc1aQ9CU62 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smc1aQ9CU62 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smc1aQ9CU62 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smc1aQ9CU62 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smc1aQ9CU62 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Smc1aQ9CU62 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smc1aQ9CU62 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Smc1aQ9CU62 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC13.99□□□□□ -0.17
Smc1aQ9CU62 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smc1aQ9CU62 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Smc1aQ9CU62 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Smc1aQ9CU62 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Smc1aQ9CU62 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Smc1aQ9CU62 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Smc1aQ9CU62 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Smc1aQ9CU62 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smc1aQ9CU62 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Smc1aQ9CU62 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Smc1aQ9CU62 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC13.99□□□□□ -0.17
Smc1aQ9CU62 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Smc1aQ9CU62 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Smc1aQ9CU62 Gm16570-201ENSMUST00000161951 436 ntBASIC13.99□□□□□ -0.17
Smc1aQ9CU62 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Smc1aQ9CU62 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Smc1aQ9CU62 Gm27320-201ENSMUST00000184892 109 ntBASIC13.99□□□□□ -0.17
Smc1aQ9CU62 Gm29199-201ENSMUST00000187766 775 ntBASIC13.99□□□□□ -0.17
Smc1aQ9CU62 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC13.99□□□□□ -0.17
Smc1aQ9CU62 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC13.99□□□□□ -0.17
Smc1aQ9CU62 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Smc1aQ9CU62 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smc1aQ9CU62 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smc1aQ9CU62 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Smc1aQ9CU62 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smc1aQ9CU62 AC122840.1-201ENSMUST00000220915 3334 ntBASIC13.99□□□□□ -0.17
Smc1aQ9CU62 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Smc1aQ9CU62 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC13.99□□□□□ -0.17
Smc1aQ9CU62 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms