Protein–RNA interactions for Protein: Q9CQ70

H2afb1, Histone H2A-Bbd type 1, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1Q9CQ70 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
H2afb1Q9CQ70 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
H2afb1Q9CQ70 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
H2afb1Q9CQ70 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
H2afb1Q9CQ70 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
H2afb1Q9CQ70 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
H2afb1Q9CQ70 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC10.24□□□□□ -0.77
H2afb1Q9CQ70 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
H2afb1Q9CQ70 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
H2afb1Q9CQ70 Gm11478-201ENSMUST00000117851 599 ntBASIC10.24□□□□□ -0.77
H2afb1Q9CQ70 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC10.24□□□□□ -0.77
H2afb1Q9CQ70 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC10.24□□□□□ -0.77
H2afb1Q9CQ70 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC10.24□□□□□ -0.77
H2afb1Q9CQ70 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC10.24□□□□□ -0.77
H2afb1Q9CQ70 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
H2afb1Q9CQ70 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
H2afb1Q9CQ70 Gm27839-201ENSMUST00000184242 106 ntBASIC10.24□□□□□ -0.77
H2afb1Q9CQ70 Ighv1-60-201ENSMUST00000195816 405 ntBASIC10.24□□□□□ -0.77
H2afb1Q9CQ70 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC10.24□□□□□ -0.77
H2afb1Q9CQ70 Gm5035-201ENSMUST00000215581 927 ntBASIC10.24□□□□□ -0.77
H2afb1Q9CQ70 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
H2afb1Q9CQ70 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
H2afb1Q9CQ70 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
H2afb1Q9CQ70 Gm6091-201ENSMUST00000098307 165 ntBASIC10.24□□□□□ -0.77
H2afb1Q9CQ70 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
H2afb1Q9CQ70 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
H2afb1Q9CQ70 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
H2afb1Q9CQ70 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
H2afb1Q9CQ70 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC10.24□□□□□ -0.77
H2afb1Q9CQ70 Nudt18-202ENSMUST00000228554 3619 ntBASIC10.24□□□□□ -0.77
H2afb1Q9CQ70 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC10.24□□□□□ -0.77
H2afb1Q9CQ70 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
H2afb1Q9CQ70 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
H2afb1Q9CQ70 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
H2afb1Q9CQ70 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
H2afb1Q9CQ70 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
H2afb1Q9CQ70 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
H2afb1Q9CQ70 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC10.24□□□□□ -0.77
H2afb1Q9CQ70 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
H2afb1Q9CQ70 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
H2afb1Q9CQ70 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC10.24□□□□□ -0.77
H2afb1Q9CQ70 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
H2afb1Q9CQ70 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
H2afb1Q9CQ70 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
H2afb1Q9CQ70 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
H2afb1Q9CQ70 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
H2afb1Q9CQ70 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC10.23□□□□□ -0.77
H2afb1Q9CQ70 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
H2afb1Q9CQ70 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
H2afb1Q9CQ70 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
H2afb1Q9CQ70 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
H2afb1Q9CQ70 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
H2afb1Q9CQ70 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
H2afb1Q9CQ70 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
H2afb1Q9CQ70 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
H2afb1Q9CQ70 Gm7224-201ENSMUST00000121359 2066 ntBASIC10.23□□□□□ -0.77
H2afb1Q9CQ70 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
H2afb1Q9CQ70 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
H2afb1Q9CQ70 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
H2afb1Q9CQ70 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC10.23□□□□□ -0.77
H2afb1Q9CQ70 Gm7029-201ENSMUST00000173226 450 ntBASIC10.23□□□□□ -0.77
H2afb1Q9CQ70 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC10.23□□□□□ -0.77
H2afb1Q9CQ70 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
H2afb1Q9CQ70 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
H2afb1Q9CQ70 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
H2afb1Q9CQ70 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
H2afb1Q9CQ70 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
H2afb1Q9CQ70 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
H2afb1Q9CQ70 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
H2afb1Q9CQ70 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC10.23□□□□□ -0.77
H2afb1Q9CQ70 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
H2afb1Q9CQ70 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC10.23□□□□□ -0.77
H2afb1Q9CQ70 AC129336.1-201ENSMUST00000220224 2277 ntBASIC10.23□□□□□ -0.77
H2afb1Q9CQ70 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
H2afb1Q9CQ70 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC10.23□□□□□ -0.77
H2afb1Q9CQ70 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
H2afb1Q9CQ70 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
H2afb1Q9CQ70 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
H2afb1Q9CQ70 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
H2afb1Q9CQ70 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
H2afb1Q9CQ70 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
H2afb1Q9CQ70 Daam2-202ENSMUST00000224595 1926 ntBASIC10.23□□□□□ -0.77
H2afb1Q9CQ70 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
H2afb1Q9CQ70 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
H2afb1Q9CQ70 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
H2afb1Q9CQ70 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
H2afb1Q9CQ70 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
H2afb1Q9CQ70 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
H2afb1Q9CQ70 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
H2afb1Q9CQ70 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
H2afb1Q9CQ70 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
H2afb1Q9CQ70 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
H2afb1Q9CQ70 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
H2afb1Q9CQ70 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC10.22□□□□□ -0.77
H2afb1Q9CQ70 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
H2afb1Q9CQ70 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
H2afb1Q9CQ70 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
H2afb1Q9CQ70 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
H2afb1Q9CQ70 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC10.22□□□□□ -0.77
H2afb1Q9CQ70 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms