Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Gm37748-201ENSMUST00000194379 1140 ntBASIC14.22□□□□□ -0.13
Trim11Q99PQ2 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Trim11Q99PQ2 Gm5904-201ENSMUST00000210286 865 ntBASIC14.22□□□□□ -0.13
Trim11Q99PQ2 AC108416.1-202ENSMUST00000228927 1201 ntBASIC14.22□□□□□ -0.13
Trim11Q99PQ2 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim11Q99PQ2 Gm24136-201ENSMUST00000083374 165 ntBASIC14.22□□□□□ -0.13
Trim11Q99PQ2 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC14.22□□□□□ -0.13
Trim11Q99PQ2 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trim11Q99PQ2 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim11Q99PQ2 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim11Q99PQ2 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim11Q99PQ2 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trim11Q99PQ2 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Trim11Q99PQ2 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Trim11Q99PQ2 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trim11Q99PQ2 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim11Q99PQ2 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim11Q99PQ2 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim11Q99PQ2 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim11Q99PQ2 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim11Q99PQ2 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC14.22□□□□□ -0.13
Trim11Q99PQ2 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim11Q99PQ2 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim11Q99PQ2 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim11Q99PQ2 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trim11Q99PQ2 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trim11Q99PQ2 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trim11Q99PQ2 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim11Q99PQ2 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trim11Q99PQ2 Gm43579-201ENSMUST00000202387 1307 ntBASIC14.21□□□□□ -0.13
Trim11Q99PQ2 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC14.21□□□□□ -0.13
Trim11Q99PQ2 AC114008.2-201ENSMUST00000227699 1347 ntBASIC14.21□□□□□ -0.13
Trim11Q99PQ2 Gm3287-205ENSMUST00000228893 1332 ntBASIC14.21□□□□□ -0.13
Trim11Q99PQ2 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Trim11Q99PQ2 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trim11Q99PQ2 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC14.21□□□□□ -0.13
Trim11Q99PQ2 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim11Q99PQ2 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
Trim11Q99PQ2 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC14.21□□□□□ -0.13
Trim11Q99PQ2 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC14.21□□□□□ -0.13
Trim11Q99PQ2 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Trim11Q99PQ2 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trim11Q99PQ2 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC14.21□□□□□ -0.13
Trim11Q99PQ2 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trim11Q99PQ2 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Trim11Q99PQ2 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Trim11Q99PQ2 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC14.21□□□□□ -0.13
Trim11Q99PQ2 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC14.21□□□□□ -0.13
Trim11Q99PQ2 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim11Q99PQ2 n-R5s195-201ENSMUST00000082891 119 ntBASIC14.21□□□□□ -0.13
Trim11Q99PQ2 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Trim11Q99PQ2 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trim11Q99PQ2 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim11Q99PQ2 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim11Q99PQ2 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC14.21□□□□□ -0.13
Trim11Q99PQ2 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim11Q99PQ2 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim11Q99PQ2 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trim11Q99PQ2 Daam2-202ENSMUST00000224595 1926 ntBASIC14.21□□□□□ -0.14
Trim11Q99PQ2 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trim11Q99PQ2 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trim11Q99PQ2 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trim11Q99PQ2 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trim11Q99PQ2 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trim11Q99PQ2 Nudt18-202ENSMUST00000228554 3619 ntBASIC14.21□□□□□ -0.14
Trim11Q99PQ2 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Trim11Q99PQ2 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Trim11Q99PQ2 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trim11Q99PQ2 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC14.2□□□□□ -0.14
Trim11Q99PQ2 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trim11Q99PQ2 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
Trim11Q99PQ2 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Trim11Q99PQ2 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Trim11Q99PQ2 Gm42748-201ENSMUST00000199354 2341 ntBASIC14.2□□□□□ -0.14
Trim11Q99PQ2 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim11Q99PQ2 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Trim11Q99PQ2 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim11Q99PQ2 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim11Q99PQ2 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Trim11Q99PQ2 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim11Q99PQ2 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim11Q99PQ2 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
Trim11Q99PQ2 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim11Q99PQ2 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Trim11Q99PQ2 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim11Q99PQ2 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim11Q99PQ2 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trim11Q99PQ2 Gm11591-201ENSMUST00000120063 702 ntBASIC14.2□□□□□ -0.14
Trim11Q99PQ2 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trim11Q99PQ2 Gm25927-201ENSMUST00000175058 117 ntBASIC14.2□□□□□ -0.14
Trim11Q99PQ2 Gm27390-201ENSMUST00000184516 176 ntBASIC14.2□□□□□ -0.14
Trim11Q99PQ2 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trim11Q99PQ2 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC14.2□□□□□ -0.14
Trim11Q99PQ2 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC14.2□□□□□ -0.14
Trim11Q99PQ2 Gm45930-201ENSMUST00000221330 292 ntBASIC14.2□□□□□ -0.14
Trim11Q99PQ2 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim11Q99PQ2 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Trim11Q99PQ2 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trim11Q99PQ2 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim11Q99PQ2 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms