Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Trim16Q99PP9 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim16Q99PP9 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC12.24□□□□□ -0.45
Trim16Q99PP9 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim16Q99PP9 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trim16Q99PP9 Gm1335-201ENSMUST00000121653 386 ntBASIC12.24□□□□□ -0.45
Trim16Q99PP9 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim16Q99PP9 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC12.24□□□□□ -0.45
Trim16Q99PP9 Mir1982-201ENSMUST00000157368 74 ntBASIC12.24□□□□□ -0.45
Trim16Q99PP9 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim16Q99PP9 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC12.24□□□□□ -0.45
Trim16Q99PP9 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC12.24□□□□□ -0.45
Trim16Q99PP9 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
Trim16Q99PP9 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC12.24□□□□□ -0.45
Trim16Q99PP9 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim16Q99PP9 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim16Q99PP9 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim16Q99PP9 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim16Q99PP9 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim16Q99PP9 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim16Q99PP9 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim16Q99PP9 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim16Q99PP9 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trim16Q99PP9 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim16Q99PP9 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim16Q99PP9 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Trim16Q99PP9 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Trim16Q99PP9 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim16Q99PP9 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim16Q99PP9 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim16Q99PP9 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim16Q99PP9 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim16Q99PP9 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim16Q99PP9 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim16Q99PP9 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trim16Q99PP9 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trim16Q99PP9 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim16Q99PP9 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Trim16Q99PP9 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim16Q99PP9 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.23□□□□□ -0.45
Trim16Q99PP9 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim16Q99PP9 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim16Q99PP9 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC12.23□□□□□ -0.45
Trim16Q99PP9 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim16Q99PP9 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Trim16Q99PP9 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC12.23□□□□□ -0.45
Trim16Q99PP9 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim16Q99PP9 Gm45643-201ENSMUST00000211364 1484 ntBASIC12.23□□□□□ -0.45
Trim16Q99PP9 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trim16Q99PP9 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim16Q99PP9 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim16Q99PP9 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim16Q99PP9 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trim16Q99PP9 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim16Q99PP9 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trim16Q99PP9 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
Trim16Q99PP9 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC12.23□□□□□ -0.45
Trim16Q99PP9 Gm12384-201ENSMUST00000119228 919 ntBASIC12.23□□□□□ -0.45
Trim16Q99PP9 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC12.23□□□□□ -0.45
Trim16Q99PP9 Gm26185-201ENSMUST00000157692 266 ntBASIC12.23□□□□□ -0.45
Trim16Q99PP9 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC12.23□□□□□ -0.45
Trim16Q99PP9 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trim16Q99PP9 Gm9061-201ENSMUST00000182707 1006 ntBASIC12.23□□□□□ -0.45
Trim16Q99PP9 Gm5896-201ENSMUST00000189662 1024 ntBASIC12.23□□□□□ -0.45
Trim16Q99PP9 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trim16Q99PP9 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Trim16Q99PP9 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim16Q99PP9 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Trim16Q99PP9 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Trim16Q99PP9 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim16Q99PP9 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim16Q99PP9 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim16Q99PP9 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim16Q99PP9 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim16Q99PP9 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim16Q99PP9 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim16Q99PP9 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim16Q99PP9 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim16Q99PP9 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim16Q99PP9 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim16Q99PP9 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim16Q99PP9 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim16Q99PP9 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC12.23□□□□□ -0.45
Trim16Q99PP9 Gm4780-202ENSMUST00000215200 2644 ntBASIC12.23□□□□□ -0.45
Trim16Q99PP9 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim16Q99PP9 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim16Q99PP9 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim16Q99PP9 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Trim16Q99PP9 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim16Q99PP9 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim16Q99PP9 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim16Q99PP9 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim16Q99PP9 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim16Q99PP9 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim16Q99PP9 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trim16Q99PP9 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trim16Q99PP9 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC12.22□□□□□ -0.45
Trim16Q99PP9 Gm14127-201ENSMUST00000117906 678 ntBASIC12.22□□□□□ -0.45
Trim16Q99PP9 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC12.22□□□□□ -0.45
Trim16Q99PP9 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms