Protein–RNA interactions for Protein: Q99PP6

Trim34a, Tripartite motif-containing protein 34A, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34aQ99PP6 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim34aQ99PP6 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim34aQ99PP6 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim34aQ99PP6 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim34aQ99PP6 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim34aQ99PP6 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Trim34aQ99PP6 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC15.37■□□□□ 0.05
Trim34aQ99PP6 Gm13408-201ENSMUST00000119822 798 ntBASIC15.37■□□□□ 0.05
Trim34aQ99PP6 Gm13935-201ENSMUST00000121859 798 ntBASIC15.37■□□□□ 0.05
Trim34aQ99PP6 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC15.37■□□□□ 0.05
Trim34aQ99PP6 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC15.37■□□□□ 0.05
Trim34aQ99PP6 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Trim34aQ99PP6 Mir7677-201ENSMUST00000184226 67 ntBASIC15.37■□□□□ 0.05
Trim34aQ99PP6 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC15.37■□□□□ 0.05
Trim34aQ99PP6 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Trim34aQ99PP6 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim34aQ99PP6 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim34aQ99PP6 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
Trim34aQ99PP6 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim34aQ99PP6 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim34aQ99PP6 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim34aQ99PP6 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC15.36■□□□□ 0.05
Trim34aQ99PP6 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC15.36■□□□□ 0.05
Trim34aQ99PP6 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim34aQ99PP6 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trim34aQ99PP6 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Trim34aQ99PP6 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim34aQ99PP6 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim34aQ99PP6 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC15.36■□□□□ 0.05
Trim34aQ99PP6 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Trim34aQ99PP6 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim34aQ99PP6 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim34aQ99PP6 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim34aQ99PP6 Gm14058-201ENSMUST00000116082 735 ntBASIC15.36■□□□□ 0.05
Trim34aQ99PP6 Gm13035-201ENSMUST00000117496 342 ntBASIC15.36■□□□□ 0.05
Trim34aQ99PP6 Gm13461-201ENSMUST00000120980 662 ntBASIC15.36■□□□□ 0.05
Trim34aQ99PP6 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC15.36■□□□□ 0.05
Trim34aQ99PP6 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC15.36■□□□□ 0.05
Trim34aQ99PP6 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC15.36■□□□□ 0.05
Trim34aQ99PP6 AC159819.2-201ENSMUST00000216151 342 ntBASIC15.36■□□□□ 0.05
Trim34aQ99PP6 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC15.36■□□□□ 0.05
Trim34aQ99PP6 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC15.36■□□□□ 0.05
Trim34aQ99PP6 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC15.36■□□□□ 0.05
Trim34aQ99PP6 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim34aQ99PP6 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trim34aQ99PP6 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim34aQ99PP6 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim34aQ99PP6 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trim34aQ99PP6 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim34aQ99PP6 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim34aQ99PP6 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim34aQ99PP6 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trim34aQ99PP6 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim34aQ99PP6 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC15.36■□□□□ 0.05
Trim34aQ99PP6 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trim34aQ99PP6 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trim34aQ99PP6 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim34aQ99PP6 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim34aQ99PP6 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim34aQ99PP6 Gm5939-201ENSMUST00000119613 2874 ntBASIC15.35■□□□□ 0.05
Trim34aQ99PP6 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim34aQ99PP6 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim34aQ99PP6 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC15.35■□□□□ 0.05
Trim34aQ99PP6 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim34aQ99PP6 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim34aQ99PP6 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim34aQ99PP6 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
Trim34aQ99PP6 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC15.35■□□□□ 0.05
Trim34aQ99PP6 Gm37835-201ENSMUST00000193305 361 ntBASIC15.35■□□□□ 0.05
Trim34aQ99PP6 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim34aQ99PP6 Gm270-201ENSMUST00000223010 976 ntBASIC15.35■□□□□ 0.05
Trim34aQ99PP6 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim34aQ99PP6 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim34aQ99PP6 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim34aQ99PP6 Ntng1-201ENSMUST00000051253 327 ntBASIC15.35■□□□□ 0.05
Trim34aQ99PP6 Gm21811-201ENSMUST00000096485 930 ntBASIC15.35■□□□□ 0.05
Trim34aQ99PP6 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC15.35■□□□□ 0.05
Trim34aQ99PP6 Gm44851-201ENSMUST00000205735 2309 ntBASIC15.35■□□□□ 0.05
Trim34aQ99PP6 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim34aQ99PP6 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trim34aQ99PP6 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim34aQ99PP6 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Trim34aQ99PP6 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trim34aQ99PP6 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC15.35■□□□□ 0.05
Trim34aQ99PP6 Gm43081-201ENSMUST00000199082 1380 ntBASIC15.35■□□□□ 0.05
Trim34aQ99PP6 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim34aQ99PP6 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim34aQ99PP6 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim34aQ99PP6 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Trim34aQ99PP6 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trim34aQ99PP6 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim34aQ99PP6 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim34aQ99PP6 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim34aQ99PP6 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim34aQ99PP6 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim34aQ99PP6 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim34aQ99PP6 Gm12501-201ENSMUST00000119163 529 ntBASIC15.34■□□□□ 0.05
Trim34aQ99PP6 Gm19353-201ENSMUST00000184561 445 ntBASIC15.34■□□□□ 0.05
Trim34aQ99PP6 Gm7467-201ENSMUST00000185173 652 ntBASIC15.34■□□□□ 0.05
Trim34aQ99PP6 Ighv4-2-201ENSMUST00000192975 362 ntBASIC15.34■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms