Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim8Q99PJ2 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim8Q99PJ2 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim8Q99PJ2 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trim8Q99PJ2 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trim8Q99PJ2 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim8Q99PJ2 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim8Q99PJ2 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim8Q99PJ2 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trim8Q99PJ2 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim8Q99PJ2 Gm18983-201ENSMUST00000222884 2729 ntBASIC12.25□□□□□ -0.45
Trim8Q99PJ2 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim8Q99PJ2 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Trim8Q99PJ2 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trim8Q99PJ2 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim8Q99PJ2 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim8Q99PJ2 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim8Q99PJ2 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim8Q99PJ2 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim8Q99PJ2 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim8Q99PJ2 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC12.25□□□□□ -0.45
Trim8Q99PJ2 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trim8Q99PJ2 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC12.25□□□□□ -0.45
Trim8Q99PJ2 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trim8Q99PJ2 Gm45059-201ENSMUST00000205558 1077 ntBASIC12.25□□□□□ -0.45
Trim8Q99PJ2 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC12.25□□□□□ -0.45
Trim8Q99PJ2 AC159006.1-201ENSMUST00000226396 258 ntBASIC12.25□□□□□ -0.45
Trim8Q99PJ2 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim8Q99PJ2 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim8Q99PJ2 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim8Q99PJ2 Gm16372-201ENSMUST00000073088 450 ntBASIC12.25□□□□□ -0.45
Trim8Q99PJ2 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim8Q99PJ2 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC12.25□□□□□ -0.45
Trim8Q99PJ2 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim8Q99PJ2 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trim8Q99PJ2 Gm5912-201ENSMUST00000122282 1438 ntBASIC12.25□□□□□ -0.45
Trim8Q99PJ2 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC12.25□□□□□ -0.45
Trim8Q99PJ2 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Trim8Q99PJ2 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trim8Q99PJ2 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim8Q99PJ2 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim8Q99PJ2 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Trim8Q99PJ2 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim8Q99PJ2 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Trim8Q99PJ2 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC12.25□□□□□ -0.45
Trim8Q99PJ2 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC12.25□□□□□ -0.45
Trim8Q99PJ2 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim8Q99PJ2 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Trim8Q99PJ2 Gm2238-201ENSMUST00000192074 3669 ntBASIC12.25□□□□□ -0.45
Trim8Q99PJ2 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trim8Q99PJ2 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim8Q99PJ2 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC12.25□□□□□ -0.45
Trim8Q99PJ2 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
Trim8Q99PJ2 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Trim8Q99PJ2 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim8Q99PJ2 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim8Q99PJ2 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim8Q99PJ2 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim8Q99PJ2 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim8Q99PJ2 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC12.25□□□□□ -0.45
Trim8Q99PJ2 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim8Q99PJ2 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim8Q99PJ2 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim8Q99PJ2 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim8Q99PJ2 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim8Q99PJ2 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim8Q99PJ2 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Trim8Q99PJ2 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Trim8Q99PJ2 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trim8Q99PJ2 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Trim8Q99PJ2 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Trim8Q99PJ2 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim8Q99PJ2 Gm13394-201ENSMUST00000121658 1000 ntBASIC12.24□□□□□ -0.45
Trim8Q99PJ2 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC12.24□□□□□ -0.45
Trim8Q99PJ2 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Trim8Q99PJ2 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trim8Q99PJ2 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trim8Q99PJ2 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim8Q99PJ2 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim8Q99PJ2 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC12.24□□□□□ -0.45
Trim8Q99PJ2 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC12.24□□□□□ -0.45
Trim8Q99PJ2 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC12.24□□□□□ -0.45
Trim8Q99PJ2 Gm8463-201ENSMUST00000208573 613 ntBASIC12.24□□□□□ -0.45
Trim8Q99PJ2 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC12.24□□□□□ -0.45
Trim8Q99PJ2 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC12.24□□□□□ -0.45
Trim8Q99PJ2 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC12.24□□□□□ -0.45
Trim8Q99PJ2 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC12.24□□□□□ -0.45
Trim8Q99PJ2 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim8Q99PJ2 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim8Q99PJ2 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim8Q99PJ2 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim8Q99PJ2 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim8Q99PJ2 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim8Q99PJ2 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim8Q99PJ2 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trim8Q99PJ2 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trim8Q99PJ2 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim8Q99PJ2 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim8Q99PJ2 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim8Q99PJ2 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms