Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.09□□□□□ -0.47
Cstf3Q99LI7 Gm18227-201ENSMUST00000211082 1468 ntBASIC12.09□□□□□ -0.47
Cstf3Q99LI7 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cstf3Q99LI7 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cstf3Q99LI7 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cstf3Q99LI7 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cstf3Q99LI7 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cstf3Q99LI7 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cstf3Q99LI7 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cstf3Q99LI7 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cstf3Q99LI7 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC12.09□□□□□ -0.47
Cstf3Q99LI7 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cstf3Q99LI7 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC12.09□□□□□ -0.47
Cstf3Q99LI7 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Cstf3Q99LI7 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cstf3Q99LI7 AC140375.2-201ENSMUST00000225283 584 ntBASIC12.09□□□□□ -0.47
Cstf3Q99LI7 AC069562.3-201ENSMUST00000225387 587 ntBASIC12.09□□□□□ -0.47
Cstf3Q99LI7 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cstf3Q99LI7 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cstf3Q99LI7 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cstf3Q99LI7 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cstf3Q99LI7 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cstf3Q99LI7 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cstf3Q99LI7 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC12.09□□□□□ -0.47
Cstf3Q99LI7 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Cstf3Q99LI7 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC12.09□□□□□ -0.47
Cstf3Q99LI7 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC12.09□□□□□ -0.47
Cstf3Q99LI7 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cstf3Q99LI7 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cstf3Q99LI7 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Cstf3Q99LI7 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Cstf3Q99LI7 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Cstf3Q99LI7 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.47
Cstf3Q99LI7 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Cstf3Q99LI7 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Cstf3Q99LI7 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.08□□□□□ -0.47
Cstf3Q99LI7 Gm2420-201ENSMUST00000119864 2149 ntBASIC12.08□□□□□ -0.47
Cstf3Q99LI7 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cstf3Q99LI7 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Cstf3Q99LI7 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cstf3Q99LI7 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cstf3Q99LI7 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cstf3Q99LI7 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cstf3Q99LI7 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cstf3Q99LI7 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cstf3Q99LI7 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cstf3Q99LI7 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cstf3Q99LI7 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cstf3Q99LI7 Matn2-203ENSMUST00000226766 3252 ntBASIC12.08□□□□□ -0.48
Cstf3Q99LI7 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Cstf3Q99LI7 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Cstf3Q99LI7 Gm12384-201ENSMUST00000119228 919 ntBASIC12.08□□□□□ -0.48
Cstf3Q99LI7 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Cstf3Q99LI7 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC12.08□□□□□ -0.48
Cstf3Q99LI7 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC12.08□□□□□ -0.48
Cstf3Q99LI7 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Cstf3Q99LI7 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cstf3Q99LI7 Gm38092-201ENSMUST00000195600 653 ntBASIC12.08□□□□□ -0.48
Cstf3Q99LI7 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC12.08□□□□□ -0.48
Cstf3Q99LI7 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cstf3Q99LI7 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cstf3Q99LI7 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cstf3Q99LI7 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Cstf3Q99LI7 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Cstf3Q99LI7 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cstf3Q99LI7 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cstf3Q99LI7 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cstf3Q99LI7 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cstf3Q99LI7 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cstf3Q99LI7 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cstf3Q99LI7 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cstf3Q99LI7 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cstf3Q99LI7 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cstf3Q99LI7 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cstf3Q99LI7 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Cstf3Q99LI7 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cstf3Q99LI7 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cstf3Q99LI7 Gm37437-201ENSMUST00000194451 1937 ntBASIC12.07□□□□□ -0.48
Cstf3Q99LI7 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cstf3Q99LI7 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cstf3Q99LI7 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Cstf3Q99LI7 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Cstf3Q99LI7 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cstf3Q99LI7 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cstf3Q99LI7 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cstf3Q99LI7 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Cstf3Q99LI7 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cstf3Q99LI7 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cstf3Q99LI7 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
Cstf3Q99LI7 Gm13492-201ENSMUST00000119772 665 ntBASIC12.07□□□□□ -0.48
Cstf3Q99LI7 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cstf3Q99LI7 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cstf3Q99LI7 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cstf3Q99LI7 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cstf3Q99LI7 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cstf3Q99LI7 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cstf3Q99LI7 Gm29127-201ENSMUST00000188304 517 ntBASIC12.07□□□□□ -0.48
Cstf3Q99LI7 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC12.07□□□□□ -0.48
Cstf3Q99LI7 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cstf3Q99LI7 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 68.6 ms