Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Cdk9Q99J95 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdk9Q99J95 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cdk9Q99J95 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdk9Q99J95 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Cdk9Q99J95 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdk9Q99J95 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Cdk9Q99J95 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC12.6□□□□□ -0.39
Cdk9Q99J95 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC12.6□□□□□ -0.39
Cdk9Q99J95 Abhd6-203ENSMUST00000225234 1958 ntBASIC12.6□□□□□ -0.39
Cdk9Q99J95 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cdk9Q99J95 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cdk9Q99J95 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdk9Q99J95 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Cdk9Q99J95 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdk9Q99J95 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Cdk9Q99J95 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdk9Q99J95 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Cdk9Q99J95 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdk9Q99J95 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdk9Q99J95 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdk9Q99J95 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cdk9Q99J95 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdk9Q99J95 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdk9Q99J95 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdk9Q99J95 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdk9Q99J95 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Cdk9Q99J95 Mir686-201ENSMUST00000102174 109 ntBASIC12.59□□□□□ -0.39
Cdk9Q99J95 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdk9Q99J95 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdk9Q99J95 Gm11978-201ENSMUST00000122315 466 ntBASIC12.59□□□□□ -0.39
Cdk9Q99J95 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC12.59□□□□□ -0.39
Cdk9Q99J95 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC12.59□□□□□ -0.39
Cdk9Q99J95 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
Cdk9Q99J95 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdk9Q99J95 AC192088.1-201ENSMUST00000227561 301 ntBASIC12.59□□□□□ -0.39
Cdk9Q99J95 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdk9Q99J95 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cdk9Q99J95 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Cdk9Q99J95 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Cdk9Q99J95 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdk9Q99J95 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cdk9Q99J95 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdk9Q99J95 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdk9Q99J95 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdk9Q99J95 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdk9Q99J95 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC12.59□□□□□ -0.39
Cdk9Q99J95 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdk9Q99J95 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdk9Q99J95 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdk9Q99J95 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdk9Q99J95 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cdk9Q99J95 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Cdk9Q99J95 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdk9Q99J95 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdk9Q99J95 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Cdk9Q99J95 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Cdk9Q99J95 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdk9Q99J95 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdk9Q99J95 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdk9Q99J95 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdk9Q99J95 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC12.58□□□□□ -0.4
Cdk9Q99J95 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdk9Q99J95 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cdk9Q99J95 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdk9Q99J95 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC12.58□□□□□ -0.4
Cdk9Q99J95 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdk9Q99J95 Gm12416-201ENSMUST00000120911 1008 ntBASIC12.58□□□□□ -0.4
Cdk9Q99J95 Gm13813-201ENSMUST00000120998 787 ntBASIC12.58□□□□□ -0.4
Cdk9Q99J95 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC12.58□□□□□ -0.4
Cdk9Q99J95 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdk9Q99J95 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC12.58□□□□□ -0.4
Cdk9Q99J95 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cdk9Q99J95 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdk9Q99J95 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdk9Q99J95 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdk9Q99J95 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdk9Q99J95 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdk9Q99J95 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdk9Q99J95 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdk9Q99J95 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdk9Q99J95 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdk9Q99J95 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Cdk9Q99J95 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdk9Q99J95 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdk9Q99J95 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdk9Q99J95 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdk9Q99J95 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cdk9Q99J95 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdk9Q99J95 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC12.57□□□□□ -0.4
Cdk9Q99J95 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Cdk9Q99J95 Gm18630-201ENSMUST00000222109 1397 ntBASIC12.57□□□□□ -0.4
Cdk9Q99J95 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdk9Q99J95 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdk9Q99J95 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC12.57□□□□□ -0.4
Cdk9Q99J95 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdk9Q99J95 AC154404.1-201ENSMUST00000223601 2077 ntBASIC12.57□□□□□ -0.4
Cdk9Q99J95 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdk9Q99J95 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdk9Q99J95 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 82.3 ms