Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Rfc4Q99J62 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rfc4Q99J62 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rfc4Q99J62 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rfc4Q99J62 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rfc4Q99J62 Gm5385-201ENSMUST00000118988 1559 ntBASIC14.38□□□□□ -0.11
Rfc4Q99J62 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rfc4Q99J62 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rfc4Q99J62 Gm45706-201ENSMUST00000213063 2136 ntBASIC14.38□□□□□ -0.11
Rfc4Q99J62 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rfc4Q99J62 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rfc4Q99J62 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rfc4Q99J62 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rfc4Q99J62 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rfc4Q99J62 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rfc4Q99J62 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Rfc4Q99J62 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC14.37□□□□□ -0.11
Rfc4Q99J62 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rfc4Q99J62 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Rfc4Q99J62 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rfc4Q99J62 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Rfc4Q99J62 Gm15703-201ENSMUST00000120250 880 ntBASIC14.37□□□□□ -0.11
Rfc4Q99J62 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC14.37□□□□□ -0.11
Rfc4Q99J62 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Rfc4Q99J62 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC14.37□□□□□ -0.11
Rfc4Q99J62 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Rfc4Q99J62 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC14.37□□□□□ -0.11
Rfc4Q99J62 Gm18038-201ENSMUST00000197900 485 ntBASIC14.37□□□□□ -0.11
Rfc4Q99J62 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC14.37□□□□□ -0.11
Rfc4Q99J62 AC154252.2-201ENSMUST00000223593 767 ntBASIC14.37□□□□□ -0.11
Rfc4Q99J62 AC138604.1-201ENSMUST00000226969 739 ntBASIC14.37□□□□□ -0.11
Rfc4Q99J62 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rfc4Q99J62 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Rfc4Q99J62 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rfc4Q99J62 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC14.37□□□□□ -0.11
Rfc4Q99J62 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rfc4Q99J62 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rfc4Q99J62 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rfc4Q99J62 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rfc4Q99J62 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Rfc4Q99J62 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rfc4Q99J62 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rfc4Q99J62 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rfc4Q99J62 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rfc4Q99J62 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rfc4Q99J62 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rfc4Q99J62 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rfc4Q99J62 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rfc4Q99J62 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rfc4Q99J62 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rfc4Q99J62 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rfc4Q99J62 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rfc4Q99J62 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rfc4Q99J62 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Rfc4Q99J62 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rfc4Q99J62 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rfc4Q99J62 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rfc4Q99J62 Gm13035-201ENSMUST00000117496 342 ntBASIC14.36□□□□□ -0.11
Rfc4Q99J62 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rfc4Q99J62 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rfc4Q99J62 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC14.36□□□□□ -0.11
Rfc4Q99J62 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Rfc4Q99J62 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Rfc4Q99J62 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rfc4Q99J62 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rfc4Q99J62 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rfc4Q99J62 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rfc4Q99J62 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rfc4Q99J62 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Rfc4Q99J62 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rfc4Q99J62 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rfc4Q99J62 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
Rfc4Q99J62 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rfc4Q99J62 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rfc4Q99J62 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rfc4Q99J62 AC154747.3-201ENSMUST00000224471 3470 ntBASIC14.35□□□□□ -0.11
Rfc4Q99J62 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rfc4Q99J62 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rfc4Q99J62 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rfc4Q99J62 Gm42863-201ENSMUST00000197875 2958 ntBASIC14.35□□□□□ -0.11
Rfc4Q99J62 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rfc4Q99J62 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rfc4Q99J62 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rfc4Q99J62 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rfc4Q99J62 Gm22133-201ENSMUST00000102082 109 ntBASIC14.35□□□□□ -0.11
Rfc4Q99J62 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rfc4Q99J62 Gm11989-201ENSMUST00000117240 672 ntBASIC14.35□□□□□ -0.11
Rfc4Q99J62 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rfc4Q99J62 Gm11362-201ENSMUST00000118838 850 ntBASIC14.35□□□□□ -0.11
Rfc4Q99J62 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC14.35□□□□□ -0.11
Rfc4Q99J62 Gm12208-201ENSMUST00000122004 163 ntBASIC14.35□□□□□ -0.11
Rfc4Q99J62 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC14.35□□□□□ -0.11
Rfc4Q99J62 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rfc4Q99J62 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rfc4Q99J62 AC154849.4-201ENSMUST00000224868 365 ntBASIC14.35□□□□□ -0.11
Rfc4Q99J62 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rfc4Q99J62 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rfc4Q99J62 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rfc4Q99J62 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rfc4Q99J62 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms