Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smc1bQ920F6 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Smc1bQ920F6 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Smc1bQ920F6 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smc1bQ920F6 Gm37105-201ENSMUST00000192251 2085 ntBASIC14.45□□□□□ -0.1
Smc1bQ920F6 AC122314.1-201ENSMUST00000223056 2239 ntBASIC14.45□□□□□ -0.1
Smc1bQ920F6 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smc1bQ920F6 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smc1bQ920F6 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smc1bQ920F6 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC14.45□□□□□ -0.1
Smc1bQ920F6 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smc1bQ920F6 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Smc1bQ920F6 Gm11628-201ENSMUST00000117568 171 ntBASIC14.45□□□□□ -0.1
Smc1bQ920F6 Gm14109-201ENSMUST00000118814 309 ntBASIC14.45□□□□□ -0.1
Smc1bQ920F6 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC14.45□□□□□ -0.1
Smc1bQ920F6 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smc1bQ920F6 Gm5597-201ENSMUST00000182353 1193 ntBASIC14.45□□□□□ -0.1
Smc1bQ920F6 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Smc1bQ920F6 Gm44100-201ENSMUST00000204329 436 ntBASIC14.45□□□□□ -0.1
Smc1bQ920F6 AC161537.1-201ENSMUST00000226199 1015 ntBASIC14.45□□□□□ -0.1
Smc1bQ920F6 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC14.45□□□□□ -0.1
Smc1bQ920F6 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smc1bQ920F6 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Smc1bQ920F6 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Smc1bQ920F6 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smc1bQ920F6 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC14.45□□□□□ -0.1
Smc1bQ920F6 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smc1bQ920F6 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smc1bQ920F6 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smc1bQ920F6 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Smc1bQ920F6 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smc1bQ920F6 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smc1bQ920F6 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smc1bQ920F6 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smc1bQ920F6 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smc1bQ920F6 Gm18263-201ENSMUST00000220846 1928 ntBASIC14.45□□□□□ -0.1
Smc1bQ920F6 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smc1bQ920F6 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Smc1bQ920F6 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smc1bQ920F6 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smc1bQ920F6 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Smc1bQ920F6 Crry-ps-201ENSMUST00000079090 1309 ntBASIC14.44□□□□□ -0.1
Smc1bQ920F6 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Smc1bQ920F6 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Smc1bQ920F6 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smc1bQ920F6 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Smc1bQ920F6 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smc1bQ920F6 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Smc1bQ920F6 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smc1bQ920F6 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Smc1bQ920F6 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smc1bQ920F6 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smc1bQ920F6 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC14.44□□□□□ -0.1
Smc1bQ920F6 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smc1bQ920F6 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC14.44□□□□□ -0.1
Smc1bQ920F6 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smc1bQ920F6 Gm3096-201ENSMUST00000185770 364 ntBASIC14.44□□□□□ -0.1
Smc1bQ920F6 Gm8885-201ENSMUST00000189382 598 ntBASIC14.44□□□□□ -0.1
Smc1bQ920F6 Gm44405-201ENSMUST00000198952 126 ntBASIC14.44□□□□□ -0.1
Smc1bQ920F6 Gm44262-201ENSMUST00000204969 372 ntBASIC14.44□□□□□ -0.1
Smc1bQ920F6 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smc1bQ920F6 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smc1bQ920F6 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smc1bQ920F6 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smc1bQ920F6 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smc1bQ920F6 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smc1bQ920F6 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Smc1bQ920F6 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smc1bQ920F6 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Smc1bQ920F6 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC14.44□□□□□ -0.1
Smc1bQ920F6 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Smc1bQ920F6 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Smc1bQ920F6 Gm17435-202ENSMUST00000212699 1998 ntBASIC14.43□□□□□ -0.1
Smc1bQ920F6 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Smc1bQ920F6 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smc1bQ920F6 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smc1bQ920F6 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smc1bQ920F6 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Smc1bQ920F6 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC14.43□□□□□ -0.1
Smc1bQ920F6 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Smc1bQ920F6 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Smc1bQ920F6 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC14.43□□□□□ -0.1
Smc1bQ920F6 Gm9550-201ENSMUST00000161130 862 ntBASIC14.43□□□□□ -0.1
Smc1bQ920F6 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC14.43□□□□□ -0.1
Smc1bQ920F6 Gm7467-201ENSMUST00000185173 652 ntBASIC14.43□□□□□ -0.1
Smc1bQ920F6 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Smc1bQ920F6 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC14.43□□□□□ -0.1
Smc1bQ920F6 AC141438.2-201ENSMUST00000215068 271 ntBASIC14.43□□□□□ -0.1
Smc1bQ920F6 AC135114.1-201ENSMUST00000228682 270 ntBASIC14.43□□□□□ -0.1
Smc1bQ920F6 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smc1bQ920F6 Gm10702-201ENSMUST00000098929 1268 ntBASIC14.43□□□□□ -0.1
Smc1bQ920F6 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smc1bQ920F6 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smc1bQ920F6 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smc1bQ920F6 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smc1bQ920F6 AC137842.1-201ENSMUST00000227896 2064 ntBASIC14.43□□□□□ -0.1
Smc1bQ920F6 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smc1bQ920F6 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Smc1bQ920F6 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smc1bQ920F6 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms