Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdha3Q91Y16 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdha3Q91Y16 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdha3Q91Y16 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdha3Q91Y16 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdha3Q91Y16 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdha3Q91Y16 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdha3Q91Y16 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdha3Q91Y16 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdha3Q91Y16 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdha3Q91Y16 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdha3Q91Y16 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdha3Q91Y16 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdha3Q91Y16 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdha3Q91Y16 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Pcdha3Q91Y16 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Pcdha3Q91Y16 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC13.08□□□□□ -0.31
Pcdha3Q91Y16 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Pcdha3Q91Y16 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdha3Q91Y16 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdha3Q91Y16 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdha3Q91Y16 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Pcdha3Q91Y16 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdha3Q91Y16 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdha3Q91Y16 Gm2420-201ENSMUST00000119864 2149 ntBASIC13.08□□□□□ -0.32
Pcdha3Q91Y16 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC13.08□□□□□ -0.32
Pcdha3Q91Y16 Gm13786-201ENSMUST00000122371 333 ntBASIC13.08□□□□□ -0.32
Pcdha3Q91Y16 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC13.08□□□□□ -0.32
Pcdha3Q91Y16 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC13.08□□□□□ -0.32
Pcdha3Q91Y16 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC13.08□□□□□ -0.32
Pcdha3Q91Y16 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC13.08□□□□□ -0.32
Pcdha3Q91Y16 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
Pcdha3Q91Y16 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdha3Q91Y16 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC13.08□□□□□ -0.32
Pcdha3Q91Y16 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC13.08□□□□□ -0.32
Pcdha3Q91Y16 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC13.08□□□□□ -0.32
Pcdha3Q91Y16 Gm10371-202ENSMUST00000228010 1081 ntBASIC13.08□□□□□ -0.32
Pcdha3Q91Y16 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdha3Q91Y16 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdha3Q91Y16 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdha3Q91Y16 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Pcdha3Q91Y16 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC13.08□□□□□ -0.32
Pcdha3Q91Y16 AC122840.1-201ENSMUST00000220915 3334 ntBASIC13.08□□□□□ -0.32
Pcdha3Q91Y16 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdha3Q91Y16 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Pcdha3Q91Y16 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdha3Q91Y16 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdha3Q91Y16 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdha3Q91Y16 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdha3Q91Y16 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC13.08□□□□□ -0.32
Pcdha3Q91Y16 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdha3Q91Y16 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdha3Q91Y16 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdha3Q91Y16 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdha3Q91Y16 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdha3Q91Y16 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdha3Q91Y16 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Pcdha3Q91Y16 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Pcdha3Q91Y16 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdha3Q91Y16 Zfp125-201ENSMUST00000079237 2488 ntBASIC13.07□□□□□ -0.32
Pcdha3Q91Y16 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdha3Q91Y16 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdha3Q91Y16 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdha3Q91Y16 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdha3Q91Y16 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdha3Q91Y16 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdha3Q91Y16 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC13.07□□□□□ -0.32
Pcdha3Q91Y16 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdha3Q91Y16 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdha3Q91Y16 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC13.07□□□□□ -0.32
Pcdha3Q91Y16 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Pcdha3Q91Y16 CT025678.1-201ENSMUST00000214795 2972 ntBASIC13.07□□□□□ -0.32
Pcdha3Q91Y16 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdha3Q91Y16 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdha3Q91Y16 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdha3Q91Y16 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdha3Q91Y16 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdha3Q91Y16 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdha3Q91Y16 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdha3Q91Y16 Gm12241-201ENSMUST00000118330 726 ntBASIC13.07□□□□□ -0.32
Pcdha3Q91Y16 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Pcdha3Q91Y16 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdha3Q91Y16 Gm9630-201ENSMUST00000178304 885 ntBASIC13.07□□□□□ -0.32
Pcdha3Q91Y16 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdha3Q91Y16 Gm27501-201ENSMUST00000183599 107 ntBASIC13.07□□□□□ -0.32
Pcdha3Q91Y16 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC13.07□□□□□ -0.32
Pcdha3Q91Y16 Gm37489-201ENSMUST00000191883 159 ntBASIC13.07□□□□□ -0.32
Pcdha3Q91Y16 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC13.07□□□□□ -0.32
Pcdha3Q91Y16 Gm7046-201ENSMUST00000221351 977 ntBASIC13.07□□□□□ -0.32
Pcdha3Q91Y16 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdha3Q91Y16 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Pcdha3Q91Y16 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Pcdha3Q91Y16 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdha3Q91Y16 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdha3Q91Y16 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdha3Q91Y16 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdha3Q91Y16 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Pcdha3Q91Y16 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Pcdha3Q91Y16 Gm43721-201ENSMUST00000199677 2313 ntBASIC13.07□□□□□ -0.32
Pcdha3Q91Y16 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 94.5 ms