Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC12.67□□□□□ -0.38
Pcdhb20Q91XZ9 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb20Q91XZ9 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb20Q91XZ9 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb20Q91XZ9 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.38
Pcdhb20Q91XZ9 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhb20Q91XZ9 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhb20Q91XZ9 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhb20Q91XZ9 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhb20Q91XZ9 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhb20Q91XZ9 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhb20Q91XZ9 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC12.66□□□□□ -0.38
Pcdhb20Q91XZ9 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhb20Q91XZ9 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhb20Q91XZ9 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC12.66□□□□□ -0.38
Pcdhb20Q91XZ9 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhb20Q91XZ9 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhb20Q91XZ9 1810053B23Rik-205ENSMUST00000188056 1592 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhb20Q91XZ9 4930421C12Rik-201ENSMUST00000200814 1574 ntBASIC12.66□□□□□ -0.38
Pcdhb20Q91XZ9 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhb20Q91XZ9 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Pcdhb20Q91XZ9 1700125H20Rik-202ENSMUST00000100681 687 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhb20Q91XZ9 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhb20Q91XZ9 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC12.66□□□□□ -0.38
Pcdhb20Q91XZ9 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC12.66□□□□□ -0.38
Pcdhb20Q91XZ9 Lipo4-201ENSMUST00000112511 1188 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Pcdhb20Q91XZ9 Gm6161-201ENSMUST00000121942 1102 ntBASIC12.66□□□□□ -0.38
Pcdhb20Q91XZ9 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC12.66□□□□□ -0.38
Pcdhb20Q91XZ9 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhb20Q91XZ9 Gm13941-201ENSMUST00000127918 736 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
Pcdhb20Q91XZ9 Gm15122-201ENSMUST00000135434 462 ntTSL 2 BASIC12.66□□□□□ -0.38
Pcdhb20Q91XZ9 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC12.66□□□□□ -0.38
Pcdhb20Q91XZ9 Gm2639-201ENSMUST00000156881 1297 ntBASIC12.66□□□□□ -0.38
Pcdhb20Q91XZ9 Snora78-201ENSMUST00000158630 128 ntBASIC12.66□□□□□ -0.38
Pcdhb20Q91XZ9 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhb20Q91XZ9 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Pcdhb20Q91XZ9 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC12.66□□□□□ -0.38
Pcdhb20Q91XZ9 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC12.66□□□□□ -0.38
Pcdhb20Q91XZ9 Gm6254-201ENSMUST00000168178 1072 ntBASIC12.66□□□□□ -0.38
Pcdhb20Q91XZ9 Gm6153-201ENSMUST00000172004 1058 ntBASIC12.66□□□□□ -0.38
Pcdhb20Q91XZ9 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Pcdhb20Q91XZ9 Gm8513-201ENSMUST00000182830 1003 ntBASIC12.66□□□□□ -0.38
Pcdhb20Q91XZ9 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Pcdhb20Q91XZ9 1700125H20Rik-201ENSMUST00000018623 966 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhb20Q91XZ9 Gm28356-202ENSMUST00000187566 858 ntBASIC12.66□□□□□ -0.38
Pcdhb20Q91XZ9 Gm37214-201ENSMUST00000192860 916 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhb20Q91XZ9 Gm37934-201ENSMUST00000192902 402 ntBASIC12.66□□□□□ -0.38
Pcdhb20Q91XZ9 Gm38333-201ENSMUST00000193608 604 ntBASIC12.66□□□□□ -0.38
Pcdhb20Q91XZ9 Gm5641-202ENSMUST00000198699 1080 ntBASIC12.66□□□□□ -0.38
Pcdhb20Q91XZ9 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC12.66□□□□□ -0.38
Pcdhb20Q91XZ9 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
Pcdhb20Q91XZ9 AC135669.1-202ENSMUST00000216742 540 ntBASIC12.66□□□□□ -0.38
Pcdhb20Q91XZ9 AC154595.3-201ENSMUST00000224579 384 ntBASIC12.66□□□□□ -0.38
Pcdhb20Q91XZ9 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC12.66□□□□□ -0.38
Pcdhb20Q91XZ9 Myf6-201ENSMUST00000044210 1263 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhb20Q91XZ9 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Pcdhb20Q91XZ9 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhb20Q91XZ9 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhb20Q91XZ9 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhb20Q91XZ9 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhb20Q91XZ9 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Pcdhb20Q91XZ9 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhb20Q91XZ9 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhb20Q91XZ9 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhb20Q91XZ9 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhb20Q91XZ9 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Pcdhb20Q91XZ9 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Pcdhb20Q91XZ9 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhb20Q91XZ9 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhb20Q91XZ9 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Pcdhb20Q91XZ9 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhb20Q91XZ9 Gm1976-202ENSMUST00000182639 1853 ntTSL 2 BASIC12.65□□□□□ -0.38
Pcdhb20Q91XZ9 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhb20Q91XZ9 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhb20Q91XZ9 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhb20Q91XZ9 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhb20Q91XZ9 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhb20Q91XZ9 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhb20Q91XZ9 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhb20Q91XZ9 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhb20Q91XZ9 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC12.65□□□□□ -0.38
Pcdhb20Q91XZ9 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhb20Q91XZ9 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhb20Q91XZ9 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhb20Q91XZ9 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhb20Q91XZ9 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhb20Q91XZ9 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
Pcdhb20Q91XZ9 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC12.65□□□□□ -0.38
Pcdhb20Q91XZ9 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Pcdhb20Q91XZ9 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhb20Q91XZ9 Gm12460-201ENSMUST00000117147 357 ntBASIC12.65□□□□□ -0.38
Pcdhb20Q91XZ9 Gm4985-201ENSMUST00000118300 1233 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Pcdhb20Q91XZ9 Gm14900-201ENSMUST00000120304 733 ntBASIC12.65□□□□□ -0.38
Pcdhb20Q91XZ9 Gm14599-201ENSMUST00000120469 474 ntBASIC12.65□□□□□ -0.38
Pcdhb20Q91XZ9 Vmn1r-ps102-201ENSMUST00000120663 886 ntBASIC12.65□□□□□ -0.38
Pcdhb20Q91XZ9 Gm2231-201ENSMUST00000125661 612 ntBASIC12.65□□□□□ -0.38
Pcdhb20Q91XZ9 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC12.65□□□□□ -0.38
Pcdhb20Q91XZ9 Gm6611-201ENSMUST00000163830 1272 ntBASIC12.65□□□□□ -0.38
Pcdhb20Q91XZ9 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC12.65□□□□□ -0.38
Pcdhb20Q91XZ9 Gm18358-201ENSMUST00000173179 1277 ntBASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 88.1 ms