Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trex1Q91XB0 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC14.26□□□□□ -0.13
Trex1Q91XB0 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trex1Q91XB0 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trex1Q91XB0 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC14.26□□□□□ -0.13
Trex1Q91XB0 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trex1Q91XB0 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trex1Q91XB0 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trex1Q91XB0 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Trex1Q91XB0 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trex1Q91XB0 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trex1Q91XB0 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trex1Q91XB0 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trex1Q91XB0 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trex1Q91XB0 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Trex1Q91XB0 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Trex1Q91XB0 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trex1Q91XB0 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC14.26□□□□□ -0.13
Trex1Q91XB0 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC14.26□□□□□ -0.13
Trex1Q91XB0 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC14.26□□□□□ -0.13
Trex1Q91XB0 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC14.26□□□□□ -0.13
Trex1Q91XB0 Gm17827-201ENSMUST00000211825 742 ntBASIC14.26□□□□□ -0.13
Trex1Q91XB0 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC14.26□□□□□ -0.13
Trex1Q91XB0 Gm5455-201ENSMUST00000058710 715 ntBASIC14.26□□□□□ -0.13
Trex1Q91XB0 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trex1Q91XB0 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Trex1Q91XB0 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trex1Q91XB0 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trex1Q91XB0 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trex1Q91XB0 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trex1Q91XB0 Gm6198-201ENSMUST00000191337 2929 ntBASIC14.26□□□□□ -0.13
Trex1Q91XB0 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trex1Q91XB0 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trex1Q91XB0 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trex1Q91XB0 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trex1Q91XB0 Gm45706-201ENSMUST00000213063 2136 ntBASIC14.26□□□□□ -0.13
Trex1Q91XB0 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trex1Q91XB0 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trex1Q91XB0 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trex1Q91XB0 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trex1Q91XB0 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Trex1Q91XB0 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trex1Q91XB0 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trex1Q91XB0 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trex1Q91XB0 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trex1Q91XB0 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trex1Q91XB0 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trex1Q91XB0 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trex1Q91XB0 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trex1Q91XB0 Gm18038-201ENSMUST00000197900 485 ntBASIC14.25□□□□□ -0.13
Trex1Q91XB0 CT009718.3-201ENSMUST00000221116 367 ntBASIC14.25□□□□□ -0.13
Trex1Q91XB0 AC154680.1-201ENSMUST00000224376 859 ntBASIC14.25□□□□□ -0.13
Trex1Q91XB0 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trex1Q91XB0 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trex1Q91XB0 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trex1Q91XB0 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trex1Q91XB0 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trex1Q91XB0 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trex1Q91XB0 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trex1Q91XB0 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trex1Q91XB0 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trex1Q91XB0 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trex1Q91XB0 AC159308.2-201ENSMUST00000213592 2325 ntBASIC14.25□□□□□ -0.13
Trex1Q91XB0 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC14.25□□□□□ -0.13
Trex1Q91XB0 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trex1Q91XB0 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trex1Q91XB0 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trex1Q91XB0 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trex1Q91XB0 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trex1Q91XB0 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC14.24□□□□□ -0.13
Trex1Q91XB0 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trex1Q91XB0 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Trex1Q91XB0 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trex1Q91XB0 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trex1Q91XB0 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trex1Q91XB0 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trex1Q91XB0 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Trex1Q91XB0 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC14.24□□□□□ -0.13
Trex1Q91XB0 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trex1Q91XB0 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Trex1Q91XB0 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trex1Q91XB0 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Trex1Q91XB0 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC14.24□□□□□ -0.13
Trex1Q91XB0 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trex1Q91XB0 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Trex1Q91XB0 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trex1Q91XB0 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC14.24□□□□□ -0.13
Trex1Q91XB0 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC14.24□□□□□ -0.13
Trex1Q91XB0 Gm9211-201ENSMUST00000182882 975 ntBASIC14.24□□□□□ -0.13
Trex1Q91XB0 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC14.24□□□□□ -0.13
Trex1Q91XB0 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC14.24□□□□□ -0.13
Trex1Q91XB0 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC14.24□□□□□ -0.13
Trex1Q91XB0 Gm7207-201ENSMUST00000211575 1067 ntBASIC14.24□□□□□ -0.13
Trex1Q91XB0 AC153954.1-201ENSMUST00000216959 255 ntBASIC14.24□□□□□ -0.13
Trex1Q91XB0 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC14.24□□□□□ -0.13
Trex1Q91XB0 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trex1Q91XB0 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC14.24□□□□□ -0.13
Trex1Q91XB0 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trex1Q91XB0 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trex1Q91XB0 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms