Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ddx41Q91VN6 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ddx41Q91VN6 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Ddx41Q91VN6 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ddx41Q91VN6 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ddx41Q91VN6 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Ddx41Q91VN6 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC14.36□□□□□ -0.11
Ddx41Q91VN6 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC14.36□□□□□ -0.11
Ddx41Q91VN6 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC14.36□□□□□ -0.11
Ddx41Q91VN6 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ddx41Q91VN6 Gm29199-201ENSMUST00000187766 775 ntBASIC14.36□□□□□ -0.11
Ddx41Q91VN6 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ddx41Q91VN6 Gm19963-201ENSMUST00000208413 1255 ntBASIC14.36□□□□□ -0.11
Ddx41Q91VN6 Gm30285-201ENSMUST00000214614 422 ntBASIC14.36□□□□□ -0.11
Ddx41Q91VN6 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC14.36□□□□□ -0.11
Ddx41Q91VN6 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ddx41Q91VN6 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Ddx41Q91VN6 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ddx41Q91VN6 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ddx41Q91VN6 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ddx41Q91VN6 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ddx41Q91VN6 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Ddx41Q91VN6 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ddx41Q91VN6 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC14.36□□□□□ -0.11
Ddx41Q91VN6 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ddx41Q91VN6 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ddx41Q91VN6 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ddx41Q91VN6 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ddx41Q91VN6 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ddx41Q91VN6 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC14.36□□□□□ -0.11
Ddx41Q91VN6 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ddx41Q91VN6 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ddx41Q91VN6 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC14.36□□□□□ -0.11
Ddx41Q91VN6 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ddx41Q91VN6 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ddx41Q91VN6 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ddx41Q91VN6 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ddx41Q91VN6 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ddx41Q91VN6 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Ddx41Q91VN6 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ddx41Q91VN6 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ddx41Q91VN6 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ddx41Q91VN6 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ddx41Q91VN6 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ddx41Q91VN6 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ddx41Q91VN6 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ddx41Q91VN6 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Ddx41Q91VN6 Gm18916-201ENSMUST00000198264 1246 ntBASIC14.35□□□□□ -0.11
Ddx41Q91VN6 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ddx41Q91VN6 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ddx41Q91VN6 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ddx41Q91VN6 AC132317.1-201ENSMUST00000227227 962 ntBASIC14.35□□□□□ -0.11
Ddx41Q91VN6 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ddx41Q91VN6 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Ddx41Q91VN6 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ddx41Q91VN6 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Ddx41Q91VN6 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Ddx41Q91VN6 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC14.35□□□□□ -0.11
Ddx41Q91VN6 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC14.35□□□□□ -0.11
Ddx41Q91VN6 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ddx41Q91VN6 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ddx41Q91VN6 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ddx41Q91VN6 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ddx41Q91VN6 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ddx41Q91VN6 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Ddx41Q91VN6 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Ddx41Q91VN6 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC14.35□□□□□ -0.11
Ddx41Q91VN6 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ddx41Q91VN6 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ddx41Q91VN6 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC14.35□□□□□ -0.11
Ddx41Q91VN6 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ddx41Q91VN6 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Ddx41Q91VN6 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ddx41Q91VN6 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ddx41Q91VN6 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ddx41Q91VN6 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Ddx41Q91VN6 Gm44806-201ENSMUST00000205574 2303 ntBASIC14.34□□□□□ -0.11
Ddx41Q91VN6 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC14.34□□□□□ -0.11
Ddx41Q91VN6 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC14.34□□□□□ -0.11
Ddx41Q91VN6 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC14.34□□□□□ -0.11
Ddx41Q91VN6 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC14.34□□□□□ -0.11
Ddx41Q91VN6 Gm9176-201ENSMUST00000219955 1120 ntBASIC14.34□□□□□ -0.11
Ddx41Q91VN6 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ddx41Q91VN6 Daam2-202ENSMUST00000224595 1926 ntBASIC14.34□□□□□ -0.11
Ddx41Q91VN6 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Ddx41Q91VN6 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Ddx41Q91VN6 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Ddx41Q91VN6 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ddx41Q91VN6 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ddx41Q91VN6 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ddx41Q91VN6 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ddx41Q91VN6 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ddx41Q91VN6 AC122860.2-201ENSMUST00000217967 2671 ntBASIC14.34□□□□□ -0.11
Ddx41Q91VN6 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ddx41Q91VN6 Gm6015-201ENSMUST00000217493 1586 ntBASIC14.34□□□□□ -0.11
Ddx41Q91VN6 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ddx41Q91VN6 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ddx41Q91VN6 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ddx41Q91VN6 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ddx41Q91VN6 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms