Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 B230112I24Rik-201ENSMUST00000203953 1229 ntBASIC13.37□□□□□ -0.27
TraipQ8VIG6 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC13.37□□□□□ -0.27
TraipQ8VIG6 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TraipQ8VIG6 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC13.37□□□□□ -0.27
TraipQ8VIG6 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC13.37□□□□□ -0.27
TraipQ8VIG6 Gm19208-201ENSMUST00000213861 912 ntBASIC13.37□□□□□ -0.27
TraipQ8VIG6 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TraipQ8VIG6 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TraipQ8VIG6 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TraipQ8VIG6 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TraipQ8VIG6 Lgi1-204ENSMUST00000196090 1789 ntTSL 5 BASIC13.37□□□□□ -0.27
TraipQ8VIG6 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC13.37□□□□□ -0.27
TraipQ8VIG6 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TraipQ8VIG6 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TraipQ8VIG6 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TraipQ8VIG6 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TraipQ8VIG6 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TraipQ8VIG6 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
TraipQ8VIG6 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC13.36□□□□□ -0.27
TraipQ8VIG6 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TraipQ8VIG6 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
TraipQ8VIG6 Gm42748-201ENSMUST00000199354 2341 ntBASIC13.36□□□□□ -0.27
TraipQ8VIG6 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC13.36□□□□□ -0.27
TraipQ8VIG6 Gm18227-201ENSMUST00000211082 1468 ntBASIC13.36□□□□□ -0.27
TraipQ8VIG6 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TraipQ8VIG6 Gm3052-202ENSMUST00000188254 2224 ntBASIC13.36□□□□□ -0.27
TraipQ8VIG6 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TraipQ8VIG6 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC13.36□□□□□ -0.27
TraipQ8VIG6 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TraipQ8VIG6 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
TraipQ8VIG6 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TraipQ8VIG6 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC13.36□□□□□ -0.27
TraipQ8VIG6 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC13.36□□□□□ -0.27
TraipQ8VIG6 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TraipQ8VIG6 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
TraipQ8VIG6 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
TraipQ8VIG6 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TraipQ8VIG6 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TraipQ8VIG6 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TraipQ8VIG6 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC13.36□□□□□ -0.27
TraipQ8VIG6 Gm45433-201ENSMUST00000209386 247 ntBASIC13.36□□□□□ -0.27
TraipQ8VIG6 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC13.36□□□□□ -0.27
TraipQ8VIG6 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TraipQ8VIG6 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TraipQ8VIG6 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
TraipQ8VIG6 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TraipQ8VIG6 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TraipQ8VIG6 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TraipQ8VIG6 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
TraipQ8VIG6 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
TraipQ8VIG6 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TraipQ8VIG6 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC13.36□□□□□ -0.27
TraipQ8VIG6 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
TraipQ8VIG6 AC154262.2-202ENSMUST00000225158 1331 ntBASIC13.36□□□□□ -0.27
TraipQ8VIG6 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TraipQ8VIG6 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TraipQ8VIG6 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TraipQ8VIG6 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
TraipQ8VIG6 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TraipQ8VIG6 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TraipQ8VIG6 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TraipQ8VIG6 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TraipQ8VIG6 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TraipQ8VIG6 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
TraipQ8VIG6 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TraipQ8VIG6 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
TraipQ8VIG6 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TraipQ8VIG6 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TraipQ8VIG6 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC13.35□□□□□ -0.27
TraipQ8VIG6 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TraipQ8VIG6 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TraipQ8VIG6 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
TraipQ8VIG6 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
TraipQ8VIG6 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC13.35□□□□□ -0.27
TraipQ8VIG6 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TraipQ8VIG6 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
TraipQ8VIG6 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TraipQ8VIG6 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
TraipQ8VIG6 Gm24934-201ENSMUST00000103764 111 ntBASIC13.35□□□□□ -0.27
TraipQ8VIG6 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TraipQ8VIG6 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC13.35□□□□□ -0.27
TraipQ8VIG6 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TraipQ8VIG6 Gm12286-201ENSMUST00000119246 1002 ntBASIC13.35□□□□□ -0.27
TraipQ8VIG6 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
TraipQ8VIG6 Gm12702-201ENSMUST00000123258 612 ntTSL 3 BASIC13.35□□□□□ -0.27
TraipQ8VIG6 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC13.35□□□□□ -0.27
TraipQ8VIG6 Gm37666-201ENSMUST00000194110 866 ntBASIC13.35□□□□□ -0.27
TraipQ8VIG6 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC13.35□□□□□ -0.27
TraipQ8VIG6 Gm32390-201ENSMUST00000212713 1172 ntBASIC13.35□□□□□ -0.27
TraipQ8VIG6 AC107638.1-201ENSMUST00000213690 1061 ntBASIC13.35□□□□□ -0.27
TraipQ8VIG6 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC13.35□□□□□ -0.27
TraipQ8VIG6 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC13.35□□□□□ -0.27
TraipQ8VIG6 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC13.35□□□□□ -0.27
TraipQ8VIG6 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
TraipQ8VIG6 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TraipQ8VIG6 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
TraipQ8VIG6 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TraipQ8VIG6 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
TraipQ8VIG6 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TraipQ8VIG6 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms