Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC12.64□□□□□ -0.39
Rpa1Q8VEE4 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rpa1Q8VEE4 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rpa1Q8VEE4 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rpa1Q8VEE4 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC12.63□□□□□ -0.39
Rpa1Q8VEE4 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rpa1Q8VEE4 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rpa1Q8VEE4 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rpa1Q8VEE4 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Rpa1Q8VEE4 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rpa1Q8VEE4 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rpa1Q8VEE4 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rpa1Q8VEE4 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC12.63□□□□□ -0.39
Rpa1Q8VEE4 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rpa1Q8VEE4 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Rpa1Q8VEE4 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Rpa1Q8VEE4 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rpa1Q8VEE4 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Rpa1Q8VEE4 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rpa1Q8VEE4 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Rpa1Q8VEE4 Gm10576-201ENSMUST00000191927 825 ntBASIC12.63□□□□□ -0.39
Rpa1Q8VEE4 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC12.63□□□□□ -0.39
Rpa1Q8VEE4 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC12.63□□□□□ -0.39
Rpa1Q8VEE4 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC12.63□□□□□ -0.39
Rpa1Q8VEE4 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rpa1Q8VEE4 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rpa1Q8VEE4 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rpa1Q8VEE4 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rpa1Q8VEE4 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Rpa1Q8VEE4 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rpa1Q8VEE4 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rpa1Q8VEE4 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Rpa1Q8VEE4 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rpa1Q8VEE4 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rpa1Q8VEE4 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rpa1Q8VEE4 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC12.63□□□□□ -0.39
Rpa1Q8VEE4 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rpa1Q8VEE4 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rpa1Q8VEE4 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rpa1Q8VEE4 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC12.63□□□□□ -0.39
Rpa1Q8VEE4 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rpa1Q8VEE4 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Rpa1Q8VEE4 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Rpa1Q8VEE4 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC12.62□□□□□ -0.39
Rpa1Q8VEE4 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Rpa1Q8VEE4 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rpa1Q8VEE4 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rpa1Q8VEE4 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Rpa1Q8VEE4 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Rpa1Q8VEE4 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC12.62□□□□□ -0.39
Rpa1Q8VEE4 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC12.62□□□□□ -0.39
Rpa1Q8VEE4 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rpa1Q8VEE4 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rpa1Q8VEE4 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC12.62□□□□□ -0.39
Rpa1Q8VEE4 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rpa1Q8VEE4 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rpa1Q8VEE4 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rpa1Q8VEE4 Gm12416-201ENSMUST00000120911 1008 ntBASIC12.62□□□□□ -0.39
Rpa1Q8VEE4 Gm12291-201ENSMUST00000121627 311 ntBASIC12.62□□□□□ -0.39
Rpa1Q8VEE4 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC12.62□□□□□ -0.39
Rpa1Q8VEE4 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC12.62□□□□□ -0.39
Rpa1Q8VEE4 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rpa1Q8VEE4 Gm27838-201ENSMUST00000184829 128 ntBASIC12.62□□□□□ -0.39
Rpa1Q8VEE4 AC155258.1-201ENSMUST00000219303 253 ntBASIC12.62□□□□□ -0.39
Rpa1Q8VEE4 AU017674-201ENSMUST00000222864 720 ntTSL 3 BASIC12.62□□□□□ -0.39
Rpa1Q8VEE4 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Rpa1Q8VEE4 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rpa1Q8VEE4 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rpa1Q8VEE4 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rpa1Q8VEE4 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC12.62□□□□□ -0.39
Rpa1Q8VEE4 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Rpa1Q8VEE4 AC154517.2-201ENSMUST00000220829 2458 ntBASIC12.62□□□□□ -0.39
Rpa1Q8VEE4 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC12.62□□□□□ -0.39
Rpa1Q8VEE4 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC12.62□□□□□ -0.39
Rpa1Q8VEE4 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rpa1Q8VEE4 Gm4735-201ENSMUST00000138679 1302 ntBASIC12.62□□□□□ -0.39
Rpa1Q8VEE4 Gm42651-201ENSMUST00000199851 1339 ntBASIC12.62□□□□□ -0.39
Rpa1Q8VEE4 Gm5855-201ENSMUST00000200240 1305 ntBASIC12.62□□□□□ -0.39
Rpa1Q8VEE4 AC154404.1-201ENSMUST00000223601 2077 ntBASIC12.61□□□□□ -0.39
Rpa1Q8VEE4 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rpa1Q8VEE4 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rpa1Q8VEE4 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rpa1Q8VEE4 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Rpa1Q8VEE4 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rpa1Q8VEE4 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Rpa1Q8VEE4 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Rpa1Q8VEE4 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rpa1Q8VEE4 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12.61□□□□□ -0.39
Rpa1Q8VEE4 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rpa1Q8VEE4 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rpa1Q8VEE4 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC12.61□□□□□ -0.39
Rpa1Q8VEE4 Gm14350-201ENSMUST00000116642 640 ntBASIC12.61□□□□□ -0.39
Rpa1Q8VEE4 Gm12151-201ENSMUST00000121374 290 ntBASIC12.61□□□□□ -0.39
Rpa1Q8VEE4 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC12.61□□□□□ -0.39
Rpa1Q8VEE4 Gm28923-201ENSMUST00000187755 322 ntBASIC12.61□□□□□ -0.39
Rpa1Q8VEE4 4933401J01Rik-201ENSMUST00000193812 1070 ntBASIC12.61□□□□□ -0.39
Rpa1Q8VEE4 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rpa1Q8VEE4 Ighv8-10-201ENSMUST00000199579 358 ntBASIC12.61□□□□□ -0.39
Rpa1Q8VEE4 Gm8227-201ENSMUST00000223306 571 ntBASIC12.61□□□□□ -0.39
Rpa1Q8VEE4 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms