Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC11.82□□□□□ -0.52
Ndc1Q8VCB1 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC11.82□□□□□ -0.52
Ndc1Q8VCB1 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ndc1Q8VCB1 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ndc1Q8VCB1 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC11.82□□□□□ -0.52
Ndc1Q8VCB1 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Ndc1Q8VCB1 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC11.82□□□□□ -0.52
Ndc1Q8VCB1 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ndc1Q8VCB1 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC11.82□□□□□ -0.52
Ndc1Q8VCB1 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Ndc1Q8VCB1 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ndc1Q8VCB1 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ndc1Q8VCB1 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ndc1Q8VCB1 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ndc1Q8VCB1 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ndc1Q8VCB1 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ndc1Q8VCB1 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC11.81□□□□□ -0.52
Ndc1Q8VCB1 Gm42480-201ENSMUST00000198434 2595 ntBASIC11.81□□□□□ -0.52
Ndc1Q8VCB1 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Ndc1Q8VCB1 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC11.81□□□□□ -0.52
Ndc1Q8VCB1 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC11.81□□□□□ -0.52
Ndc1Q8VCB1 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
Ndc1Q8VCB1 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC11.81□□□□□ -0.52
Ndc1Q8VCB1 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ndc1Q8VCB1 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ndc1Q8VCB1 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ndc1Q8VCB1 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Ndc1Q8VCB1 Gm38385-201ENSMUST00000194454 2351 ntBASIC11.81□□□□□ -0.52
Ndc1Q8VCB1 Gm44401-201ENSMUST00000204462 2375 ntBASIC11.81□□□□□ -0.52
Ndc1Q8VCB1 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ndc1Q8VCB1 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Ndc1Q8VCB1 Gm12715-201ENSMUST00000121430 1128 ntBASIC11.81□□□□□ -0.52
Ndc1Q8VCB1 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC11.81□□□□□ -0.52
Ndc1Q8VCB1 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC11.81□□□□□ -0.52
Ndc1Q8VCB1 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ndc1Q8VCB1 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC11.81□□□□□ -0.52
Ndc1Q8VCB1 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ndc1Q8VCB1 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC11.81□□□□□ -0.52
Ndc1Q8VCB1 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC11.81□□□□□ -0.52
Ndc1Q8VCB1 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC11.81□□□□□ -0.52
Ndc1Q8VCB1 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ndc1Q8VCB1 AC108416.1-202ENSMUST00000228927 1201 ntBASIC11.81□□□□□ -0.52
Ndc1Q8VCB1 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ndc1Q8VCB1 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ndc1Q8VCB1 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ndc1Q8VCB1 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ndc1Q8VCB1 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ndc1Q8VCB1 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC11.81□□□□□ -0.52
Ndc1Q8VCB1 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ndc1Q8VCB1 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ndc1Q8VCB1 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Ndc1Q8VCB1 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ndc1Q8VCB1 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ndc1Q8VCB1 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ndc1Q8VCB1 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ndc1Q8VCB1 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC11.81□□□□□ -0.52
Ndc1Q8VCB1 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
Ndc1Q8VCB1 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ndc1Q8VCB1 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ndc1Q8VCB1 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ndc1Q8VCB1 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC11.81□□□□□ -0.52
Ndc1Q8VCB1 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ndc1Q8VCB1 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ndc1Q8VCB1 Gm44094-201ENSMUST00000204703 2030 ntBASIC11.81□□□□□ -0.52
Ndc1Q8VCB1 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ndc1Q8VCB1 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
Ndc1Q8VCB1 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ndc1Q8VCB1 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ndc1Q8VCB1 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ndc1Q8VCB1 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ndc1Q8VCB1 Gm7993-201ENSMUST00000200970 1384 ntBASIC11.8□□□□□ -0.52
Ndc1Q8VCB1 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Ndc1Q8VCB1 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ndc1Q8VCB1 Gm37324-201ENSMUST00000194500 4504 ntBASIC11.8□□□□□ -0.52
Ndc1Q8VCB1 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ndc1Q8VCB1 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Ndc1Q8VCB1 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ndc1Q8VCB1 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ndc1Q8VCB1 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ndc1Q8VCB1 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ndc1Q8VCB1 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ndc1Q8VCB1 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ndc1Q8VCB1 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ndc1Q8VCB1 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ndc1Q8VCB1 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ndc1Q8VCB1 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ndc1Q8VCB1 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ndc1Q8VCB1 Gm12058-201ENSMUST00000118614 437 ntBASIC11.8□□□□□ -0.52
Ndc1Q8VCB1 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ndc1Q8VCB1 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ndc1Q8VCB1 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ndc1Q8VCB1 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ndc1Q8VCB1 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Ndc1Q8VCB1 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ndc1Q8VCB1 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC11.8□□□□□ -0.52
Ndc1Q8VCB1 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ndc1Q8VCB1 Gm18615-201ENSMUST00000222919 1031 ntBASIC11.8□□□□□ -0.52
Ndc1Q8VCB1 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Ndc1Q8VCB1 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ndc1Q8VCB1 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms