Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Ccdc9Q8VC31 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ccdc9Q8VC31 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC15.02■□□□□ -0
Ccdc9Q8VC31 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ccdc9Q8VC31 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC15.02■□□□□ -0
Ccdc9Q8VC31 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC15.02■□□□□ -0
Ccdc9Q8VC31 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Ccdc9Q8VC31 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ccdc9Q8VC31 Gm44415-201ENSMUST00000204151 2112 ntBASIC15.02■□□□□ -0
Ccdc9Q8VC31 Parvg-207ENSMUST00000163667 2700 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Ccdc9Q8VC31 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC15.02■□□□□ -0
Ccdc9Q8VC31 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ccdc9Q8VC31 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ccdc9Q8VC31 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Ccdc9Q8VC31 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ccdc9Q8VC31 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Ccdc9Q8VC31 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ccdc9Q8VC31 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC15.02■□□□□ -0
Ccdc9Q8VC31 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC15.02■□□□□ -0
Ccdc9Q8VC31 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ccdc9Q8VC31 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ccdc9Q8VC31 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Ccdc9Q8VC31 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC15.02■□□□□ -0
Ccdc9Q8VC31 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC15.02■□□□□ -0
Ccdc9Q8VC31 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC15.02■□□□□ -0
Ccdc9Q8VC31 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC15.02■□□□□ -0
Ccdc9Q8VC31 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC15.02■□□□□ -0
Ccdc9Q8VC31 Gm43474-201ENSMUST00000196415 774 ntBASIC15.02■□□□□ -0
Ccdc9Q8VC31 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC15.02■□□□□ -0
Ccdc9Q8VC31 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC15.02■□□□□ -0
Ccdc9Q8VC31 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC15.02■□□□□ -0
Ccdc9Q8VC31 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Ccdc9Q8VC31 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ccdc9Q8VC31 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC15.02□□□□□ -0.01
Ccdc9Q8VC31 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
Ccdc9Q8VC31 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ccdc9Q8VC31 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ccdc9Q8VC31 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ccdc9Q8VC31 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ccdc9Q8VC31 Ift88os-201ENSMUST00000149702 2016 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Ccdc9Q8VC31 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ccdc9Q8VC31 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Ccdc9Q8VC31 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc9Q8VC31 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc9Q8VC31 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc9Q8VC31 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc9Q8VC31 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc9Q8VC31 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc9Q8VC31 Vrtn-203ENSMUST00000167227 3440 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
Ccdc9Q8VC31 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Ccdc9Q8VC31 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc9Q8VC31 Nfic-201ENSMUST00000020461 3348 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc9Q8VC31 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
Ccdc9Q8VC31 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc9Q8VC31 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc9Q8VC31 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC15.01□□□□□ -0.01
Ccdc9Q8VC31 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC15.01□□□□□ -0.01
Ccdc9Q8VC31 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc9Q8VC31 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc9Q8VC31 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc9Q8VC31 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc9Q8VC31 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc9Q8VC31 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC15.01□□□□□ -0.01
Ccdc9Q8VC31 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC15.01□□□□□ -0.01
Ccdc9Q8VC31 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc9Q8VC31 AC159196.2-201ENSMUST00000224082 1622 ntBASIC15.01□□□□□ -0.01
Ccdc9Q8VC31 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc9Q8VC31 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc9Q8VC31 Gm43267-201ENSMUST00000199664 1796 ntBASIC15.01□□□□□ -0.01
Ccdc9Q8VC31 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Ccdc9Q8VC31 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ccdc9Q8VC31 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ccdc9Q8VC31 Nufip2-204ENSMUST00000181023 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Ccdc9Q8VC31 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Ccdc9Q8VC31 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC15□□□□□ -0.01
Ccdc9Q8VC31 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC15□□□□□ -0.01
Ccdc9Q8VC31 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ccdc9Q8VC31 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Ccdc9Q8VC31 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC15□□□□□ -0.01
Ccdc9Q8VC31 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Ccdc9Q8VC31 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Ccdc9Q8VC31 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC15□□□□□ -0.01
Ccdc9Q8VC31 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ccdc9Q8VC31 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC15□□□□□ -0.01
Ccdc9Q8VC31 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ccdc9Q8VC31 Gm29310-201ENSMUST00000185468 696 ntBASIC15□□□□□ -0.01
Ccdc9Q8VC31 Gm21825-201ENSMUST00000185728 696 ntBASIC15□□□□□ -0.01
Ccdc9Q8VC31 Gm29109-201ENSMUST00000185895 696 ntBASIC15□□□□□ -0.01
Ccdc9Q8VC31 Gm21896-201ENSMUST00000186520 696 ntBASIC15□□□□□ -0.01
Ccdc9Q8VC31 Gm21873-201ENSMUST00000186728 696 ntBASIC15□□□□□ -0.01
Ccdc9Q8VC31 Gm21794-201ENSMUST00000187056 696 ntBASIC15□□□□□ -0.01
Ccdc9Q8VC31 Gm21880-201ENSMUST00000187275 696 ntBASIC15□□□□□ -0.01
Ccdc9Q8VC31 Gm21826-201ENSMUST00000187451 696 ntBASIC15□□□□□ -0.01
Ccdc9Q8VC31 Gm21198-201ENSMUST00000188393 696 ntBASIC15□□□□□ -0.01
Ccdc9Q8VC31 Gm21749-201ENSMUST00000189343 696 ntBASIC15□□□□□ -0.01
Ccdc9Q8VC31 Gm21901-201ENSMUST00000189568 696 ntBASIC15□□□□□ -0.01
Ccdc9Q8VC31 Gm29424-201ENSMUST00000189716 696 ntBASIC15□□□□□ -0.01
Ccdc9Q8VC31 Gm28599-201ENSMUST00000189838 694 ntBASIC15□□□□□ -0.01
Ccdc9Q8VC31 Gm21867-201ENSMUST00000189917 696 ntBASIC15□□□□□ -0.01
Ccdc9Q8VC31 Gm29269-201ENSMUST00000190087 696 ntBASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms