Protein–RNA interactions for Protein: Q8R422

Cd109, CD109 antigen, mousemouse

Predictions only

Length 1,442 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd109Q8R422 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cd109Q8R422 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Cd109Q8R422 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cd109Q8R422 Gm23912-201ENSMUST00000104687 87 ntBASIC17.54■□□□□ 0.4
Cd109Q8R422 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cd109Q8R422 Gm13809-201ENSMUST00000117921 597 ntBASIC17.54■□□□□ 0.4
Cd109Q8R422 Mup-ps26-201ENSMUST00000121751 202 ntBASIC17.54■□□□□ 0.4
Cd109Q8R422 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
Cd109Q8R422 Gm10774-201ENSMUST00000188689 204 ntBASIC17.54■□□□□ 0.4
Cd109Q8R422 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Cd109Q8R422 Gm5705-201ENSMUST00000066241 711 ntBASIC17.54■□□□□ 0.4
Cd109Q8R422 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Cd109Q8R422 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cd109Q8R422 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Cd109Q8R422 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Cd109Q8R422 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Cd109Q8R422 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC17.53■□□□□ 0.4
Cd109Q8R422 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC17.53■□□□□ 0.4
Cd109Q8R422 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cd109Q8R422 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cd109Q8R422 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Cd109Q8R422 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cd109Q8R422 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cd109Q8R422 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Cd109Q8R422 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cd109Q8R422 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cd109Q8R422 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Cd109Q8R422 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Cd109Q8R422 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cd109Q8R422 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Cd109Q8R422 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Cd109Q8R422 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Cd109Q8R422 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cd109Q8R422 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cd109Q8R422 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cd109Q8R422 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cd109Q8R422 Gm24891-201ENSMUST00000104391 136 ntBASIC17.53■□□□□ 0.4
Cd109Q8R422 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
Cd109Q8R422 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC17.53■□□□□ 0.4
Cd109Q8R422 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cd109Q8R422 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Cd109Q8R422 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Cd109Q8R422 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Cd109Q8R422 Ighv1-48-201ENSMUST00000191795 294 ntBASIC17.53■□□□□ 0.4
Cd109Q8R422 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
Cd109Q8R422 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC17.53■□□□□ 0.4
Cd109Q8R422 AC135469.1-201ENSMUST00000225984 772 ntBASIC17.53■□□□□ 0.4
Cd109Q8R422 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Cd109Q8R422 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cd109Q8R422 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cd109Q8R422 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cd109Q8R422 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Cd109Q8R422 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cd109Q8R422 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Cd109Q8R422 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cd109Q8R422 Gm45266-201ENSMUST00000210111 2173 ntBASIC17.52■□□□□ 0.4
Cd109Q8R422 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Cd109Q8R422 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
Cd109Q8R422 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cd109Q8R422 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cd109Q8R422 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC17.52■□□□□ 0.4
Cd109Q8R422 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Cd109Q8R422 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Cd109Q8R422 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC17.52■□□□□ 0.4
Cd109Q8R422 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cd109Q8R422 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Cd109Q8R422 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Cd109Q8R422 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cd109Q8R422 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cd109Q8R422 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Cd109Q8R422 Gm10152-201ENSMUST00000193475 1344 ntBASIC17.52■□□□□ 0.4
Cd109Q8R422 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cd109Q8R422 Gm8038-201ENSMUST00000164674 2044 ntBASIC17.52■□□□□ 0.4
Cd109Q8R422 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Cd109Q8R422 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Cd109Q8R422 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Cd109Q8R422 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cd109Q8R422 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC17.52■□□□□ 0.4
Cd109Q8R422 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC17.52■□□□□ 0.4
Cd109Q8R422 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC17.52■□□□□ 0.4
Cd109Q8R422 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Cd109Q8R422 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Cd109Q8R422 Gm6905-201ENSMUST00000205729 511 ntBASIC17.52■□□□□ 0.4
Cd109Q8R422 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cd109Q8R422 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cd109Q8R422 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cd109Q8R422 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cd109Q8R422 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Cd109Q8R422 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cd109Q8R422 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cd109Q8R422 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cd109Q8R422 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Cd109Q8R422 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cd109Q8R422 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Cd109Q8R422 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cd109Q8R422 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Cd109Q8R422 Gm14150-201ENSMUST00000122404 1354 ntBASIC17.51■□□□□ 0.39
Cd109Q8R422 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Cd109Q8R422 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cd109Q8R422 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms