Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Chmp7Q8R1T1 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Chmp7Q8R1T1 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Chmp7Q8R1T1 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Chmp7Q8R1T1 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Chmp7Q8R1T1 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Chmp7Q8R1T1 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Chmp7Q8R1T1 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC15.94■□□□□ 0.14
Chmp7Q8R1T1 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC15.94■□□□□ 0.14
Chmp7Q8R1T1 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Chmp7Q8R1T1 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
Chmp7Q8R1T1 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC15.94■□□□□ 0.14
Chmp7Q8R1T1 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC15.94■□□□□ 0.14
Chmp7Q8R1T1 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Chmp7Q8R1T1 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Chmp7Q8R1T1 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC15.94■□□□□ 0.14
Chmp7Q8R1T1 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Chmp7Q8R1T1 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC15.94■□□□□ 0.14
Chmp7Q8R1T1 Gm5847-201ENSMUST00000178959 1595 ntBASIC15.94■□□□□ 0.14
Chmp7Q8R1T1 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Chmp7Q8R1T1 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Chmp7Q8R1T1 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Chmp7Q8R1T1 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Chmp7Q8R1T1 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Chmp7Q8R1T1 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Chmp7Q8R1T1 AC159308.2-201ENSMUST00000213592 2325 ntBASIC15.94■□□□□ 0.14
Chmp7Q8R1T1 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Chmp7Q8R1T1 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC15.94■□□□□ 0.14
Chmp7Q8R1T1 AC151895.1-201ENSMUST00000219025 1742 ntBASIC15.94■□□□□ 0.14
Chmp7Q8R1T1 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Chmp7Q8R1T1 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Chmp7Q8R1T1 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Chmp7Q8R1T1 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Chmp7Q8R1T1 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC15.93■□□□□ 0.14
Chmp7Q8R1T1 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC15.93■□□□□ 0.14
Chmp7Q8R1T1 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC15.93■□□□□ 0.14
Chmp7Q8R1T1 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Chmp7Q8R1T1 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Chmp7Q8R1T1 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Chmp7Q8R1T1 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Chmp7Q8R1T1 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Chmp7Q8R1T1 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC15.93■□□□□ 0.14
Chmp7Q8R1T1 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC15.93■□□□□ 0.14
Chmp7Q8R1T1 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC15.93■□□□□ 0.14
Chmp7Q8R1T1 Gm14058-201ENSMUST00000116082 735 ntBASIC15.93■□□□□ 0.14
Chmp7Q8R1T1 Gm13408-201ENSMUST00000119822 798 ntBASIC15.93■□□□□ 0.14
Chmp7Q8R1T1 Gm13935-201ENSMUST00000121859 798 ntBASIC15.93■□□□□ 0.14
Chmp7Q8R1T1 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Chmp7Q8R1T1 Mir7677-201ENSMUST00000184226 67 ntBASIC15.93■□□□□ 0.14
Chmp7Q8R1T1 Gm3508-201ENSMUST00000186012 792 ntBASIC15.93■□□□□ 0.14
Chmp7Q8R1T1 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC15.93■□□□□ 0.14
Chmp7Q8R1T1 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Chmp7Q8R1T1 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC15.93■□□□□ 0.14
Chmp7Q8R1T1 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC15.93■□□□□ 0.14
Chmp7Q8R1T1 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Chmp7Q8R1T1 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC15.93■□□□□ 0.14
Chmp7Q8R1T1 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Chmp7Q8R1T1 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC15.93■□□□□ 0.14
Chmp7Q8R1T1 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Chmp7Q8R1T1 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Chmp7Q8R1T1 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Chmp7Q8R1T1 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Chmp7Q8R1T1 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Chmp7Q8R1T1 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Chmp7Q8R1T1 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Chmp7Q8R1T1 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Chmp7Q8R1T1 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Chmp7Q8R1T1 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Chmp7Q8R1T1 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Chmp7Q8R1T1 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC15.92■□□□□ 0.14
Chmp7Q8R1T1 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Chmp7Q8R1T1 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Chmp7Q8R1T1 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Chmp7Q8R1T1 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Chmp7Q8R1T1 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Chmp7Q8R1T1 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Chmp7Q8R1T1 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Chmp7Q8R1T1 Gm13035-201ENSMUST00000117496 342 ntBASIC15.92■□□□□ 0.14
Chmp7Q8R1T1 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
Chmp7Q8R1T1 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC15.92■□□□□ 0.14
Chmp7Q8R1T1 Gm10109-202ENSMUST00000206890 1211 ntBASIC15.92■□□□□ 0.14
Chmp7Q8R1T1 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Chmp7Q8R1T1 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Chmp7Q8R1T1 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC15.92■□□□□ 0.14
Chmp7Q8R1T1 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Chmp7Q8R1T1 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Chmp7Q8R1T1 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Chmp7Q8R1T1 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Chmp7Q8R1T1 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Chmp7Q8R1T1 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC15.92■□□□□ 0.14
Chmp7Q8R1T1 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Chmp7Q8R1T1 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Chmp7Q8R1T1 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Chmp7Q8R1T1 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
Chmp7Q8R1T1 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Chmp7Q8R1T1 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Chmp7Q8R1T1 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Chmp7Q8R1T1 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
Chmp7Q8R1T1 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Chmp7Q8R1T1 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms