Protein–RNA interactions for Protein: Q8R1J3

Zcchc9, Zinc finger CCHC domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc9Q8R1J3 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.52□□□□□ -0.41
Zcchc9Q8R1J3 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Zcchc9Q8R1J3 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Zcchc9Q8R1J3 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Zcchc9Q8R1J3 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Zcchc9Q8R1J3 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Zcchc9Q8R1J3 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Zcchc9Q8R1J3 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Zcchc9Q8R1J3 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Zcchc9Q8R1J3 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Zcchc9Q8R1J3 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Zcchc9Q8R1J3 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Zcchc9Q8R1J3 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Zcchc9Q8R1J3 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Zcchc9Q8R1J3 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Zcchc9Q8R1J3 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Zcchc9Q8R1J3 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Zcchc9Q8R1J3 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Zcchc9Q8R1J3 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Zcchc9Q8R1J3 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Zcchc9Q8R1J3 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Zcchc9Q8R1J3 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Zcchc9Q8R1J3 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Zcchc9Q8R1J3 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Zcchc9Q8R1J3 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Zcchc9Q8R1J3 Gm4909-201ENSMUST00000118749 794 ntBASIC12.51□□□□□ -0.41
Zcchc9Q8R1J3 Gm14109-201ENSMUST00000118814 309 ntBASIC12.51□□□□□ -0.41
Zcchc9Q8R1J3 Gm12217-201ENSMUST00000118858 696 ntBASIC12.51□□□□□ -0.41
Zcchc9Q8R1J3 Gm14208-201ENSMUST00000119645 678 ntBASIC12.51□□□□□ -0.41
Zcchc9Q8R1J3 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Zcchc9Q8R1J3 Gm44262-201ENSMUST00000204969 372 ntBASIC12.51□□□□□ -0.41
Zcchc9Q8R1J3 Abhd11os-203ENSMUST00000222613 363 ntBASIC12.51□□□□□ -0.41
Zcchc9Q8R1J3 AC166095.1-201ENSMUST00000223731 1241 ntBASIC12.51□□□□□ -0.41
Zcchc9Q8R1J3 AC161537.1-201ENSMUST00000226199 1015 ntBASIC12.51□□□□□ -0.41
Zcchc9Q8R1J3 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Zcchc9Q8R1J3 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Zcchc9Q8R1J3 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Zcchc9Q8R1J3 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Zcchc9Q8R1J3 Crry-ps-201ENSMUST00000079090 1309 ntBASIC12.51□□□□□ -0.41
Zcchc9Q8R1J3 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Zcchc9Q8R1J3 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Zcchc9Q8R1J3 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Zcchc9Q8R1J3 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Zcchc9Q8R1J3 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Zcchc9Q8R1J3 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Zcchc9Q8R1J3 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Zcchc9Q8R1J3 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Zcchc9Q8R1J3 Gm5846-201ENSMUST00000193146 1414 ntBASIC12.51□□□□□ -0.41
Zcchc9Q8R1J3 Gm7789-202ENSMUST00000211273 1400 ntBASIC12.51□□□□□ -0.41
Zcchc9Q8R1J3 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Zcchc9Q8R1J3 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Zcchc9Q8R1J3 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Zcchc9Q8R1J3 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Zcchc9Q8R1J3 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Zcchc9Q8R1J3 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Zcchc9Q8R1J3 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Zcchc9Q8R1J3 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Zcchc9Q8R1J3 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Zcchc9Q8R1J3 Gm5466-201ENSMUST00000119395 1890 ntBASIC12.51□□□□□ -0.41
Zcchc9Q8R1J3 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Zcchc9Q8R1J3 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Zcchc9Q8R1J3 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Zcchc9Q8R1J3 AC137842.1-201ENSMUST00000227896 2064 ntBASIC12.5□□□□□ -0.41
Zcchc9Q8R1J3 Gm19817-201ENSMUST00000199764 2132 ntBASIC12.5□□□□□ -0.41
Zcchc9Q8R1J3 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Zcchc9Q8R1J3 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Zcchc9Q8R1J3 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Zcchc9Q8R1J3 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Zcchc9Q8R1J3 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Zcchc9Q8R1J3 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Zcchc9Q8R1J3 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Zcchc9Q8R1J3 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Zcchc9Q8R1J3 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Zcchc9Q8R1J3 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC12.5□□□□□ -0.41
Zcchc9Q8R1J3 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
Zcchc9Q8R1J3 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Zcchc9Q8R1J3 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
Zcchc9Q8R1J3 Gm26361-201ENSMUST00000158868 186 ntBASIC12.5□□□□□ -0.41
Zcchc9Q8R1J3 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Zcchc9Q8R1J3 Mir5120-201ENSMUST00000175020 78 ntBASIC12.5□□□□□ -0.41
Zcchc9Q8R1J3 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC12.5□□□□□ -0.41
Zcchc9Q8R1J3 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Zcchc9Q8R1J3 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC12.5□□□□□ -0.41
Zcchc9Q8R1J3 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Zcchc9Q8R1J3 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Zcchc9Q8R1J3 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Zcchc9Q8R1J3 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Zcchc9Q8R1J3 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC12.5□□□□□ -0.41
Zcchc9Q8R1J3 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Zcchc9Q8R1J3 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Zcchc9Q8R1J3 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Zcchc9Q8R1J3 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Zcchc9Q8R1J3 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Zcchc9Q8R1J3 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Zcchc9Q8R1J3 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Zcchc9Q8R1J3 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Zcchc9Q8R1J3 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Zcchc9Q8R1J3 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Zcchc9Q8R1J3 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Zcchc9Q8R1J3 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms