Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sf3a1Q8K4Z5 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sf3a1Q8K4Z5 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Sf3a1Q8K4Z5 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Sf3a1Q8K4Z5 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sf3a1Q8K4Z5 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Sf3a1Q8K4Z5 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sf3a1Q8K4Z5 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Sf3a1Q8K4Z5 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC15.29■□□□□ 0.04
Sf3a1Q8K4Z5 Gm12314-201ENSMUST00000118104 538 ntBASIC15.29■□□□□ 0.04
Sf3a1Q8K4Z5 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC15.29■□□□□ 0.04
Sf3a1Q8K4Z5 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC15.29■□□□□ 0.04
Sf3a1Q8K4Z5 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC15.29■□□□□ 0.04
Sf3a1Q8K4Z5 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC15.29■□□□□ 0.04
Sf3a1Q8K4Z5 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC15.29■□□□□ 0.04
Sf3a1Q8K4Z5 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC15.29■□□□□ 0.04
Sf3a1Q8K4Z5 AC166095.1-201ENSMUST00000223731 1241 ntBASIC15.29■□□□□ 0.04
Sf3a1Q8K4Z5 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sf3a1Q8K4Z5 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sf3a1Q8K4Z5 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Sf3a1Q8K4Z5 Gm17383-201ENSMUST00000078739 1041 ntBASIC15.29■□□□□ 0.04
Sf3a1Q8K4Z5 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC15.29■□□□□ 0.04
Sf3a1Q8K4Z5 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sf3a1Q8K4Z5 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Sf3a1Q8K4Z5 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sf3a1Q8K4Z5 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Sf3a1Q8K4Z5 Gm45266-201ENSMUST00000210111 2173 ntBASIC15.29■□□□□ 0.04
Sf3a1Q8K4Z5 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Sf3a1Q8K4Z5 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Sf3a1Q8K4Z5 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sf3a1Q8K4Z5 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sf3a1Q8K4Z5 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sf3a1Q8K4Z5 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Sf3a1Q8K4Z5 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC15.28■□□□□ 0.04
Sf3a1Q8K4Z5 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Sf3a1Q8K4Z5 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Sf3a1Q8K4Z5 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sf3a1Q8K4Z5 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Sf3a1Q8K4Z5 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sf3a1Q8K4Z5 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sf3a1Q8K4Z5 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sf3a1Q8K4Z5 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sf3a1Q8K4Z5 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Sf3a1Q8K4Z5 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sf3a1Q8K4Z5 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sf3a1Q8K4Z5 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sf3a1Q8K4Z5 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Sf3a1Q8K4Z5 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sf3a1Q8K4Z5 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
Sf3a1Q8K4Z5 Gm5597-201ENSMUST00000182353 1193 ntBASIC15.28■□□□□ 0.04
Sf3a1Q8K4Z5 Gm9022-201ENSMUST00000182482 992 ntBASIC15.28■□□□□ 0.04
Sf3a1Q8K4Z5 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC15.28■□□□□ 0.04
Sf3a1Q8K4Z5 Gm6621-201ENSMUST00000193251 772 ntBASIC15.28■□□□□ 0.04
Sf3a1Q8K4Z5 Gm6334-201ENSMUST00000207083 228 ntBASIC15.28■□□□□ 0.04
Sf3a1Q8K4Z5 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC15.28■□□□□ 0.04
Sf3a1Q8K4Z5 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC15.28■□□□□ 0.04
Sf3a1Q8K4Z5 Gm5950-201ENSMUST00000213337 772 ntBASIC15.28■□□□□ 0.04
Sf3a1Q8K4Z5 AC125209.1-201ENSMUST00000225812 766 ntBASIC15.28■□□□□ 0.04
Sf3a1Q8K4Z5 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sf3a1Q8K4Z5 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sf3a1Q8K4Z5 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sf3a1Q8K4Z5 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Sf3a1Q8K4Z5 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Sf3a1Q8K4Z5 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sf3a1Q8K4Z5 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sf3a1Q8K4Z5 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sf3a1Q8K4Z5 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sf3a1Q8K4Z5 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sf3a1Q8K4Z5 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sf3a1Q8K4Z5 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Sf3a1Q8K4Z5 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sf3a1Q8K4Z5 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Sf3a1Q8K4Z5 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sf3a1Q8K4Z5 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC15.27■□□□□ 0.04
Sf3a1Q8K4Z5 Gm18227-201ENSMUST00000211082 1468 ntBASIC15.27■□□□□ 0.04
Sf3a1Q8K4Z5 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sf3a1Q8K4Z5 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sf3a1Q8K4Z5 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sf3a1Q8K4Z5 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sf3a1Q8K4Z5 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC15.27■□□□□ 0.04
Sf3a1Q8K4Z5 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Sf3a1Q8K4Z5 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Sf3a1Q8K4Z5 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Sf3a1Q8K4Z5 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sf3a1Q8K4Z5 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sf3a1Q8K4Z5 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Sf3a1Q8K4Z5 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sf3a1Q8K4Z5 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Sf3a1Q8K4Z5 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Sf3a1Q8K4Z5 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Sf3a1Q8K4Z5 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Sf3a1Q8K4Z5 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Sf3a1Q8K4Z5 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Sf3a1Q8K4Z5 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Sf3a1Q8K4Z5 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC15.27■□□□□ 0.04
Sf3a1Q8K4Z5 Gm5637-201ENSMUST00000153890 1119 ntBASIC15.27■□□□□ 0.04
Sf3a1Q8K4Z5 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Sf3a1Q8K4Z5 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sf3a1Q8K4Z5 Gm37201-201ENSMUST00000191845 523 ntBASIC15.27■□□□□ 0.04
Sf3a1Q8K4Z5 Gm39404-201ENSMUST00000216350 313 ntBASIC15.27■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 67.6 ms