Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Ebf4Q8K4J2 AC124577.2-201ENSMUST00000217413 2420 ntBASIC11.36□□□□□ -0.59
Ebf4Q8K4J2 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ebf4Q8K4J2 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ebf4Q8K4J2 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Ebf4Q8K4J2 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC11.36□□□□□ -0.59
Ebf4Q8K4J2 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ebf4Q8K4J2 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Ebf4Q8K4J2 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Ebf4Q8K4J2 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ebf4Q8K4J2 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Ebf4Q8K4J2 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ebf4Q8K4J2 Mir449b-201ENSMUST00000104833 80 ntBASIC11.36□□□□□ -0.59
Ebf4Q8K4J2 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC11.36□□□□□ -0.59
Ebf4Q8K4J2 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC11.36□□□□□ -0.59
Ebf4Q8K4J2 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ebf4Q8K4J2 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC11.36□□□□□ -0.59
Ebf4Q8K4J2 Gm37277-201ENSMUST00000194052 1111 ntBASIC11.36□□□□□ -0.59
Ebf4Q8K4J2 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC11.36□□□□□ -0.59
Ebf4Q8K4J2 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ebf4Q8K4J2 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC11.36□□□□□ -0.59
Ebf4Q8K4J2 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ebf4Q8K4J2 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ebf4Q8K4J2 AC101945.2-201ENSMUST00000227886 1377 ntBASIC11.36□□□□□ -0.59
Ebf4Q8K4J2 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Ebf4Q8K4J2 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ebf4Q8K4J2 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ebf4Q8K4J2 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ebf4Q8K4J2 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ebf4Q8K4J2 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ebf4Q8K4J2 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ebf4Q8K4J2 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ebf4Q8K4J2 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ebf4Q8K4J2 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ebf4Q8K4J2 AC160405.1-201ENSMUST00000218207 1545 ntBASIC11.35□□□□□ -0.59
Ebf4Q8K4J2 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Ebf4Q8K4J2 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Ebf4Q8K4J2 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC11.35□□□□□ -0.59
Ebf4Q8K4J2 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ebf4Q8K4J2 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC11.35□□□□□ -0.59
Ebf4Q8K4J2 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ebf4Q8K4J2 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Ebf4Q8K4J2 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Ebf4Q8K4J2 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ebf4Q8K4J2 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC11.35□□□□□ -0.59
Ebf4Q8K4J2 Gm14350-201ENSMUST00000116642 640 ntBASIC11.35□□□□□ -0.59
Ebf4Q8K4J2 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC11.35□□□□□ -0.59
Ebf4Q8K4J2 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC11.35□□□□□ -0.59
Ebf4Q8K4J2 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC11.35□□□□□ -0.59
Ebf4Q8K4J2 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC11.35□□□□□ -0.59
Ebf4Q8K4J2 Gm27680-201ENSMUST00000184192 160 ntBASIC11.35□□□□□ -0.59
Ebf4Q8K4J2 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC11.35□□□□□ -0.59
Ebf4Q8K4J2 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC11.35□□□□□ -0.59
Ebf4Q8K4J2 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC11.35□□□□□ -0.59
Ebf4Q8K4J2 AC140397.2-201ENSMUST00000224213 834 ntBASIC11.35□□□□□ -0.59
Ebf4Q8K4J2 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ebf4Q8K4J2 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Ebf4Q8K4J2 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ebf4Q8K4J2 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ebf4Q8K4J2 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ebf4Q8K4J2 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ebf4Q8K4J2 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ebf4Q8K4J2 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ebf4Q8K4J2 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Ebf4Q8K4J2 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ebf4Q8K4J2 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ebf4Q8K4J2 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ebf4Q8K4J2 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC11.35□□□□□ -0.59
Ebf4Q8K4J2 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ebf4Q8K4J2 Gm37580-201ENSMUST00000192408 2800 ntBASIC11.35□□□□□ -0.59
Ebf4Q8K4J2 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC11.35□□□□□ -0.59
Ebf4Q8K4J2 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ebf4Q8K4J2 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC11.35□□□□□ -0.59
Ebf4Q8K4J2 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ebf4Q8K4J2 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ebf4Q8K4J2 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Ebf4Q8K4J2 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ebf4Q8K4J2 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Ebf4Q8K4J2 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ebf4Q8K4J2 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ebf4Q8K4J2 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ebf4Q8K4J2 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ebf4Q8K4J2 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ebf4Q8K4J2 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Ebf4Q8K4J2 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ebf4Q8K4J2 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ebf4Q8K4J2 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Ebf4Q8K4J2 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC11.34□□□□□ -0.59
Ebf4Q8K4J2 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC11.34□□□□□ -0.59
Ebf4Q8K4J2 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC11.34□□□□□ -0.59
Ebf4Q8K4J2 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ebf4Q8K4J2 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ebf4Q8K4J2 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ebf4Q8K4J2 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC11.34□□□□□ -0.59
Ebf4Q8K4J2 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC11.34□□□□□ -0.59
Ebf4Q8K4J2 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Ebf4Q8K4J2 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC11.34□□□□□ -0.59
Ebf4Q8K4J2 Ighv8-10-201ENSMUST00000199579 358 ntBASIC11.34□□□□□ -0.59
Ebf4Q8K4J2 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
Ebf4Q8K4J2 Gm10371-202ENSMUST00000228010 1081 ntBASIC11.34□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms