Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rfwd3Q8CIK8 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rfwd3Q8CIK8 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Rfwd3Q8CIK8 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Rfwd3Q8CIK8 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Rfwd3Q8CIK8 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Rfwd3Q8CIK8 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC11.77□□□□□ -0.52
Rfwd3Q8CIK8 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Rfwd3Q8CIK8 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Rfwd3Q8CIK8 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Rfwd3Q8CIK8 Gm43045-201ENSMUST00000198725 2095 ntBASIC11.77□□□□□ -0.52
Rfwd3Q8CIK8 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Rfwd3Q8CIK8 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Rfwd3Q8CIK8 AC116503.1-201ENSMUST00000215445 2192 ntBASIC11.77□□□□□ -0.53
Rfwd3Q8CIK8 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Rfwd3Q8CIK8 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rfwd3Q8CIK8 Gm37472-201ENSMUST00000192342 4052 ntBASIC11.77□□□□□ -0.53
Rfwd3Q8CIK8 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rfwd3Q8CIK8 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Rfwd3Q8CIK8 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rfwd3Q8CIK8 Mir1247-201ENSMUST00000116706 82 ntBASIC11.77□□□□□ -0.53
Rfwd3Q8CIK8 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC11.77□□□□□ -0.53
Rfwd3Q8CIK8 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC11.77□□□□□ -0.53
Rfwd3Q8CIK8 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rfwd3Q8CIK8 Gm27572-201ENSMUST00000183702 255 ntBASIC11.77□□□□□ -0.53
Rfwd3Q8CIK8 Gm42693-201ENSMUST00000196779 631 ntBASIC11.77□□□□□ -0.53
Rfwd3Q8CIK8 Gm42627-201ENSMUST00000197347 224 ntBASIC11.77□□□□□ -0.53
Rfwd3Q8CIK8 Gm43118-201ENSMUST00000199149 775 ntBASIC11.77□□□□□ -0.53
Rfwd3Q8CIK8 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rfwd3Q8CIK8 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Rfwd3Q8CIK8 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rfwd3Q8CIK8 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Rfwd3Q8CIK8 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Rfwd3Q8CIK8 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Rfwd3Q8CIK8 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rfwd3Q8CIK8 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rfwd3Q8CIK8 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Rfwd3Q8CIK8 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Rfwd3Q8CIK8 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rfwd3Q8CIK8 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rfwd3Q8CIK8 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Rfwd3Q8CIK8 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rfwd3Q8CIK8 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.53
Rfwd3Q8CIK8 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rfwd3Q8CIK8 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
Rfwd3Q8CIK8 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rfwd3Q8CIK8 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Rfwd3Q8CIK8 Gm7114-201ENSMUST00000190159 1789 ntBASIC11.77□□□□□ -0.53
Rfwd3Q8CIK8 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rfwd3Q8CIK8 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rfwd3Q8CIK8 Gm27194-201ENSMUST00000175753 2936 ntBASIC11.76□□□□□ -0.53
Rfwd3Q8CIK8 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Rfwd3Q8CIK8 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Rfwd3Q8CIK8 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rfwd3Q8CIK8 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC11.76□□□□□ -0.53
Rfwd3Q8CIK8 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rfwd3Q8CIK8 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Rfwd3Q8CIK8 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC11.76□□□□□ -0.53
Rfwd3Q8CIK8 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rfwd3Q8CIK8 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rfwd3Q8CIK8 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Rfwd3Q8CIK8 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rfwd3Q8CIK8 Gm11658-201ENSMUST00000120913 1008 ntBASIC11.76□□□□□ -0.53
Rfwd3Q8CIK8 Gm2467-201ENSMUST00000182266 1010 ntBASIC11.76□□□□□ -0.53
Rfwd3Q8CIK8 Gm6981-201ENSMUST00000182467 1008 ntBASIC11.76□□□□□ -0.53
Rfwd3Q8CIK8 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rfwd3Q8CIK8 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC11.76□□□□□ -0.53
Rfwd3Q8CIK8 Gm42863-201ENSMUST00000197875 2958 ntBASIC11.76□□□□□ -0.53
Rfwd3Q8CIK8 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Rfwd3Q8CIK8 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC11.76□□□□□ -0.53
Rfwd3Q8CIK8 CU024892.2-201ENSMUST00000224608 832 ntBASIC11.76□□□□□ -0.53
Rfwd3Q8CIK8 AC140406.1-201ENSMUST00000226481 465 ntBASIC11.76□□□□□ -0.53
Rfwd3Q8CIK8 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rfwd3Q8CIK8 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rfwd3Q8CIK8 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rfwd3Q8CIK8 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rfwd3Q8CIK8 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rfwd3Q8CIK8 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rfwd3Q8CIK8 Gm42840-201ENSMUST00000200303 2251 ntBASIC11.76□□□□□ -0.53
Rfwd3Q8CIK8 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rfwd3Q8CIK8 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC11.76□□□□□ -0.53
Rfwd3Q8CIK8 Gm45743-201ENSMUST00000212701 2795 ntBASIC11.76□□□□□ -0.53
Rfwd3Q8CIK8 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rfwd3Q8CIK8 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rfwd3Q8CIK8 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rfwd3Q8CIK8 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC11.76□□□□□ -0.53
Rfwd3Q8CIK8 Gm6211-201ENSMUST00000147973 4275 ntBASIC11.76□□□□□ -0.53
Rfwd3Q8CIK8 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rfwd3Q8CIK8 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rfwd3Q8CIK8 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rfwd3Q8CIK8 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Rfwd3Q8CIK8 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rfwd3Q8CIK8 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rfwd3Q8CIK8 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rfwd3Q8CIK8 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rfwd3Q8CIK8 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC11.76□□□□□ -0.53
Rfwd3Q8CIK8 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Rfwd3Q8CIK8 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Rfwd3Q8CIK8 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rfwd3Q8CIK8 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms