Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Syne4Q8CII8 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Syne4Q8CII8 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Syne4Q8CII8 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Syne4Q8CII8 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Syne4Q8CII8 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Syne4Q8CII8 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Syne4Q8CII8 AC130671.2-201ENSMUST00000227224 1621 ntBASIC14.08□□□□□ -0.15
Syne4Q8CII8 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Syne4Q8CII8 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Syne4Q8CII8 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Syne4Q8CII8 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Syne4Q8CII8 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Syne4Q8CII8 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Syne4Q8CII8 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Syne4Q8CII8 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Syne4Q8CII8 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Syne4Q8CII8 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
Syne4Q8CII8 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Syne4Q8CII8 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Syne4Q8CII8 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Syne4Q8CII8 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Syne4Q8CII8 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Syne4Q8CII8 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Syne4Q8CII8 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Syne4Q8CII8 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC14.08□□□□□ -0.16
Syne4Q8CII8 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Syne4Q8CII8 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC14.08□□□□□ -0.16
Syne4Q8CII8 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC14.08□□□□□ -0.16
Syne4Q8CII8 Gm4726-201ENSMUST00000135604 736 ntBASIC14.08□□□□□ -0.16
Syne4Q8CII8 Gm7666-201ENSMUST00000146631 819 ntBASIC14.08□□□□□ -0.16
Syne4Q8CII8 Gm6019-201ENSMUST00000148369 736 ntBASIC14.08□□□□□ -0.16
Syne4Q8CII8 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Syne4Q8CII8 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Syne4Q8CII8 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Syne4Q8CII8 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Syne4Q8CII8 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Syne4Q8CII8 Gm8343-201ENSMUST00000182705 994 ntBASIC14.08□□□□□ -0.16
Syne4Q8CII8 Gm28324-201ENSMUST00000187913 264 ntBASIC14.08□□□□□ -0.16
Syne4Q8CII8 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Syne4Q8CII8 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC14.08□□□□□ -0.16
Syne4Q8CII8 Gm10371-202ENSMUST00000228010 1081 ntBASIC14.08□□□□□ -0.16
Syne4Q8CII8 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Syne4Q8CII8 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Syne4Q8CII8 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Syne4Q8CII8 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Syne4Q8CII8 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Syne4Q8CII8 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Syne4Q8CII8 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Syne4Q8CII8 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Syne4Q8CII8 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Syne4Q8CII8 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Syne4Q8CII8 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Syne4Q8CII8 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Syne4Q8CII8 Gm45546-201ENSMUST00000211053 2394 ntBASIC14.08□□□□□ -0.16
Syne4Q8CII8 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Syne4Q8CII8 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Syne4Q8CII8 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Syne4Q8CII8 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Syne4Q8CII8 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Syne4Q8CII8 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC14.07□□□□□ -0.16
Syne4Q8CII8 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Syne4Q8CII8 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Syne4Q8CII8 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC14.07□□□□□ -0.16
Syne4Q8CII8 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Syne4Q8CII8 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Syne4Q8CII8 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Syne4Q8CII8 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC14.07□□□□□ -0.16
Syne4Q8CII8 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Syne4Q8CII8 Gm11509-201ENSMUST00000117358 325 ntBASIC14.07□□□□□ -0.16
Syne4Q8CII8 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC14.07□□□□□ -0.16
Syne4Q8CII8 Cd63-ps-202ENSMUST00000154992 717 ntBASIC14.07□□□□□ -0.16
Syne4Q8CII8 Gm34023-201ENSMUST00000195539 217 ntBASIC14.07□□□□□ -0.16
Syne4Q8CII8 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Syne4Q8CII8 Gm4607-201ENSMUST00000206649 577 ntBASIC14.07□□□□□ -0.16
Syne4Q8CII8 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC14.07□□□□□ -0.16
Syne4Q8CII8 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Syne4Q8CII8 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Syne4Q8CII8 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Syne4Q8CII8 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Syne4Q8CII8 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Syne4Q8CII8 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Syne4Q8CII8 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Syne4Q8CII8 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Syne4Q8CII8 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Syne4Q8CII8 Gm8617-201ENSMUST00000118796 2222 ntBASIC14.07□□□□□ -0.16
Syne4Q8CII8 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Syne4Q8CII8 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Syne4Q8CII8 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC14.07□□□□□ -0.16
Syne4Q8CII8 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Syne4Q8CII8 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Syne4Q8CII8 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Syne4Q8CII8 Acot6-202ENSMUST00000222921 3622 ntBASIC14.07□□□□□ -0.16
Syne4Q8CII8 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Syne4Q8CII8 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Syne4Q8CII8 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Syne4Q8CII8 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Syne4Q8CII8 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Syne4Q8CII8 Gm9072-201ENSMUST00000218390 1514 ntBASIC14.06□□□□□ -0.16
Syne4Q8CII8 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms