Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CopaQ8CIE6 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CopaQ8CIE6 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CopaQ8CIE6 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CopaQ8CIE6 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CopaQ8CIE6 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CopaQ8CIE6 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CopaQ8CIE6 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
CopaQ8CIE6 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CopaQ8CIE6 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CopaQ8CIE6 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC12.79□□□□□ -0.36
CopaQ8CIE6 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CopaQ8CIE6 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CopaQ8CIE6 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CopaQ8CIE6 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CopaQ8CIE6 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CopaQ8CIE6 Gm9025-201ENSMUST00000122415 1575 ntBASIC12.78□□□□□ -0.36
CopaQ8CIE6 AC113060.1-201ENSMUST00000225689 1573 ntBASIC12.78□□□□□ -0.36
CopaQ8CIE6 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
CopaQ8CIE6 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CopaQ8CIE6 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
CopaQ8CIE6 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CopaQ8CIE6 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CopaQ8CIE6 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CopaQ8CIE6 Gm5637-201ENSMUST00000153890 1119 ntBASIC12.78□□□□□ -0.36
CopaQ8CIE6 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
CopaQ8CIE6 Gm17208-201ENSMUST00000168388 535 ntBASIC12.78□□□□□ -0.36
CopaQ8CIE6 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CopaQ8CIE6 Gm6621-201ENSMUST00000193251 772 ntBASIC12.78□□□□□ -0.36
CopaQ8CIE6 Gm18584-201ENSMUST00000203098 964 ntBASIC12.78□□□□□ -0.36
CopaQ8CIE6 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC12.78□□□□□ -0.36
CopaQ8CIE6 Gm45484-201ENSMUST00000210310 1141 ntBASIC12.78□□□□□ -0.36
CopaQ8CIE6 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CopaQ8CIE6 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
CopaQ8CIE6 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CopaQ8CIE6 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC12.78□□□□□ -0.36
CopaQ8CIE6 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
CopaQ8CIE6 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC12.78□□□□□ -0.36
CopaQ8CIE6 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
CopaQ8CIE6 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CopaQ8CIE6 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CopaQ8CIE6 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CopaQ8CIE6 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CopaQ8CIE6 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CopaQ8CIE6 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CopaQ8CIE6 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
CopaQ8CIE6 Nupl1-206ENSMUST00000225111 2936 ntBASIC12.78□□□□□ -0.36
CopaQ8CIE6 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CopaQ8CIE6 Gm15897-201ENSMUST00000117770 1486 ntBASIC12.78□□□□□ -0.36
CopaQ8CIE6 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CopaQ8CIE6 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CopaQ8CIE6 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CopaQ8CIE6 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
CopaQ8CIE6 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CopaQ8CIE6 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CopaQ8CIE6 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
CopaQ8CIE6 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
CopaQ8CIE6 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CopaQ8CIE6 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CopaQ8CIE6 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
CopaQ8CIE6 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CopaQ8CIE6 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
CopaQ8CIE6 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.77□□□□□ -0.36
CopaQ8CIE6 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CopaQ8CIE6 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CopaQ8CIE6 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
CopaQ8CIE6 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
CopaQ8CIE6 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
CopaQ8CIE6 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
CopaQ8CIE6 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
CopaQ8CIE6 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
CopaQ8CIE6 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
CopaQ8CIE6 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
CopaQ8CIE6 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CopaQ8CIE6 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CopaQ8CIE6 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC12.77□□□□□ -0.37
CopaQ8CIE6 Gm24548-201ENSMUST00000158650 108 ntBASIC12.77□□□□□ -0.37
CopaQ8CIE6 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC12.77□□□□□ -0.37
CopaQ8CIE6 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC12.77□□□□□ -0.37
CopaQ8CIE6 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
CopaQ8CIE6 Gm2991-201ENSMUST00000173338 480 ntBASIC12.77□□□□□ -0.37
CopaQ8CIE6 Mospd4-201ENSMUST00000180618 576 ntBASIC12.77□□□□□ -0.37
CopaQ8CIE6 Gm37259-201ENSMUST00000193903 849 ntBASIC12.77□□□□□ -0.37
CopaQ8CIE6 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC12.77□□□□□ -0.37
CopaQ8CIE6 Gm32025-201ENSMUST00000217960 307 ntBASIC12.77□□□□□ -0.37
CopaQ8CIE6 AC132384.14-201ENSMUST00000219346 1147 ntBASIC12.77□□□□□ -0.37
CopaQ8CIE6 Gm5781-201ENSMUST00000219792 443 ntBASIC12.77□□□□□ -0.37
CopaQ8CIE6 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
CopaQ8CIE6 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CopaQ8CIE6 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC12.77□□□□□ -0.37
CopaQ8CIE6 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
CopaQ8CIE6 Gm43417-201ENSMUST00000201586 5207 ntBASIC12.77□□□□□ -0.37
CopaQ8CIE6 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CopaQ8CIE6 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
CopaQ8CIE6 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
CopaQ8CIE6 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CopaQ8CIE6 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CopaQ8CIE6 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CopaQ8CIE6 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC12.77□□□□□ -0.37
CopaQ8CIE6 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms