Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc87Q8CDL9 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc87Q8CDL9 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC13.26□□□□□ -0.29
Ccdc87Q8CDL9 Ighv1-60-201ENSMUST00000195816 405 ntBASIC13.26□□□□□ -0.29
Ccdc87Q8CDL9 Gm42442-201ENSMUST00000197951 1133 ntBASIC13.26□□□□□ -0.29
Ccdc87Q8CDL9 Gm42929-201ENSMUST00000198374 1286 ntBASIC13.26□□□□□ -0.29
Ccdc87Q8CDL9 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc87Q8CDL9 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC13.26□□□□□ -0.29
Ccdc87Q8CDL9 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Ccdc87Q8CDL9 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc87Q8CDL9 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc87Q8CDL9 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc87Q8CDL9 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc87Q8CDL9 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc87Q8CDL9 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc87Q8CDL9 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc87Q8CDL9 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc87Q8CDL9 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Ccdc87Q8CDL9 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc87Q8CDL9 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc87Q8CDL9 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc87Q8CDL9 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Ccdc87Q8CDL9 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc87Q8CDL9 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc87Q8CDL9 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc87Q8CDL9 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc87Q8CDL9 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc87Q8CDL9 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc87Q8CDL9 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc87Q8CDL9 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Ccdc87Q8CDL9 Gm38049-201ENSMUST00000195698 1372 ntBASIC13.25□□□□□ -0.29
Ccdc87Q8CDL9 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc87Q8CDL9 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc87Q8CDL9 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc87Q8CDL9 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Ccdc87Q8CDL9 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC13.25□□□□□ -0.29
Ccdc87Q8CDL9 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC13.25□□□□□ -0.29
Ccdc87Q8CDL9 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc87Q8CDL9 Gm8213-201ENSMUST00000118191 441 ntBASIC13.25□□□□□ -0.29
Ccdc87Q8CDL9 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc87Q8CDL9 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC13.25□□□□□ -0.29
Ccdc87Q8CDL9 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc87Q8CDL9 Gm24644-201ENSMUST00000157114 139 ntBASIC13.25□□□□□ -0.29
Ccdc87Q8CDL9 Gm22331-201ENSMUST00000158066 136 ntBASIC13.25□□□□□ -0.29
Ccdc87Q8CDL9 Gm35960-201ENSMUST00000202712 767 ntBASIC13.25□□□□□ -0.29
Ccdc87Q8CDL9 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC13.25□□□□□ -0.29
Ccdc87Q8CDL9 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc87Q8CDL9 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC13.25□□□□□ -0.29
Ccdc87Q8CDL9 AC153937.1-201ENSMUST00000218734 412 ntBASIC13.25□□□□□ -0.29
Ccdc87Q8CDL9 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Ccdc87Q8CDL9 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc87Q8CDL9 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc87Q8CDL9 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Ccdc87Q8CDL9 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC13.25□□□□□ -0.29
Ccdc87Q8CDL9 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc87Q8CDL9 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Ccdc87Q8CDL9 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
Ccdc87Q8CDL9 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc87Q8CDL9 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
Ccdc87Q8CDL9 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Ccdc87Q8CDL9 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc87Q8CDL9 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc87Q8CDL9 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc87Q8CDL9 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc87Q8CDL9 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Ccdc87Q8CDL9 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc87Q8CDL9 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc87Q8CDL9 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc87Q8CDL9 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc87Q8CDL9 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC13.24□□□□□ -0.29
Ccdc87Q8CDL9 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc87Q8CDL9 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc87Q8CDL9 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc87Q8CDL9 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc87Q8CDL9 Map1b-203ENSMUST00000223725 2669 ntBASIC13.24□□□□□ -0.29
Ccdc87Q8CDL9 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Ccdc87Q8CDL9 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Ccdc87Q8CDL9 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC13.24□□□□□ -0.29
Ccdc87Q8CDL9 Gm10156-201ENSMUST00000122364 462 ntBASIC13.24□□□□□ -0.29
Ccdc87Q8CDL9 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC13.24□□□□□ -0.29
Ccdc87Q8CDL9 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC13.24□□□□□ -0.29
Ccdc87Q8CDL9 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc87Q8CDL9 Gm42599-201ENSMUST00000201308 469 ntBASIC13.24□□□□□ -0.29
Ccdc87Q8CDL9 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC13.24□□□□□ -0.29
Ccdc87Q8CDL9 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc87Q8CDL9 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc87Q8CDL9 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc87Q8CDL9 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Ccdc87Q8CDL9 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc87Q8CDL9 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc87Q8CDL9 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC13.24□□□□□ -0.29
Ccdc87Q8CDL9 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc87Q8CDL9 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc87Q8CDL9 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc87Q8CDL9 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc87Q8CDL9 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc87Q8CDL9 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Ccdc87Q8CDL9 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc87Q8CDL9 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc87Q8CDL9 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms