Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vcpip1Q8CDG3 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Vcpip1Q8CDG3 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vcpip1Q8CDG3 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vcpip1Q8CDG3 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Vcpip1Q8CDG3 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Vcpip1Q8CDG3 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vcpip1Q8CDG3 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Vcpip1Q8CDG3 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vcpip1Q8CDG3 Gm6992-201ENSMUST00000217973 1607 ntBASIC13.43□□□□□ -0.26
Vcpip1Q8CDG3 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vcpip1Q8CDG3 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
Vcpip1Q8CDG3 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vcpip1Q8CDG3 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vcpip1Q8CDG3 Gm15703-201ENSMUST00000120250 880 ntBASIC13.43□□□□□ -0.26
Vcpip1Q8CDG3 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC13.43□□□□□ -0.26
Vcpip1Q8CDG3 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Vcpip1Q8CDG3 Gm16296-201ENSMUST00000159905 325 ntBASIC13.43□□□□□ -0.26
Vcpip1Q8CDG3 Gm26927-201ENSMUST00000182385 965 ntBASIC13.43□□□□□ -0.26
Vcpip1Q8CDG3 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
Vcpip1Q8CDG3 Gm29649-201ENSMUST00000185649 419 ntBASIC13.43□□□□□ -0.26
Vcpip1Q8CDG3 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC13.43□□□□□ -0.26
Vcpip1Q8CDG3 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC13.43□□□□□ -0.26
Vcpip1Q8CDG3 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Vcpip1Q8CDG3 Gm9299-201ENSMUST00000206392 1140 ntBASIC13.43□□□□□ -0.26
Vcpip1Q8CDG3 Gm32025-201ENSMUST00000217960 307 ntBASIC13.43□□□□□ -0.26
Vcpip1Q8CDG3 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Vcpip1Q8CDG3 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vcpip1Q8CDG3 Gm6091-201ENSMUST00000098307 165 ntBASIC13.43□□□□□ -0.26
Vcpip1Q8CDG3 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Vcpip1Q8CDG3 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vcpip1Q8CDG3 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Vcpip1Q8CDG3 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vcpip1Q8CDG3 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC13.43□□□□□ -0.26
Vcpip1Q8CDG3 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Vcpip1Q8CDG3 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vcpip1Q8CDG3 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vcpip1Q8CDG3 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vcpip1Q8CDG3 Gm18227-201ENSMUST00000211082 1468 ntBASIC13.42□□□□□ -0.26
Vcpip1Q8CDG3 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vcpip1Q8CDG3 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Vcpip1Q8CDG3 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
Vcpip1Q8CDG3 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Vcpip1Q8CDG3 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vcpip1Q8CDG3 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vcpip1Q8CDG3 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vcpip1Q8CDG3 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vcpip1Q8CDG3 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Vcpip1Q8CDG3 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vcpip1Q8CDG3 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Vcpip1Q8CDG3 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vcpip1Q8CDG3 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC13.42□□□□□ -0.26
Vcpip1Q8CDG3 Gm12363-201ENSMUST00000122250 668 ntBASIC13.42□□□□□ -0.26
Vcpip1Q8CDG3 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC13.42□□□□□ -0.26
Vcpip1Q8CDG3 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Vcpip1Q8CDG3 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC13.42□□□□□ -0.26
Vcpip1Q8CDG3 Gm27572-201ENSMUST00000183702 255 ntBASIC13.42□□□□□ -0.26
Vcpip1Q8CDG3 Gm27390-201ENSMUST00000184516 176 ntBASIC13.42□□□□□ -0.26
Vcpip1Q8CDG3 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC13.42□□□□□ -0.26
Vcpip1Q8CDG3 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Vcpip1Q8CDG3 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vcpip1Q8CDG3 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vcpip1Q8CDG3 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vcpip1Q8CDG3 AC126262.1-201ENSMUST00000221802 1904 ntBASIC13.42□□□□□ -0.26
Vcpip1Q8CDG3 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vcpip1Q8CDG3 Gm18222-201ENSMUST00000202416 1387 ntBASIC13.42□□□□□ -0.26
Vcpip1Q8CDG3 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vcpip1Q8CDG3 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Vcpip1Q8CDG3 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Vcpip1Q8CDG3 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC13.42□□□□□ -0.26
Vcpip1Q8CDG3 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Vcpip1Q8CDG3 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vcpip1Q8CDG3 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vcpip1Q8CDG3 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Vcpip1Q8CDG3 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vcpip1Q8CDG3 Gm4735-201ENSMUST00000138679 1302 ntBASIC13.41□□□□□ -0.26
Vcpip1Q8CDG3 Gm5855-201ENSMUST00000200240 1305 ntBASIC13.41□□□□□ -0.26
Vcpip1Q8CDG3 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vcpip1Q8CDG3 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vcpip1Q8CDG3 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vcpip1Q8CDG3 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vcpip1Q8CDG3 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vcpip1Q8CDG3 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vcpip1Q8CDG3 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vcpip1Q8CDG3 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vcpip1Q8CDG3 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vcpip1Q8CDG3 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vcpip1Q8CDG3 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vcpip1Q8CDG3 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vcpip1Q8CDG3 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vcpip1Q8CDG3 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vcpip1Q8CDG3 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Vcpip1Q8CDG3 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC13.41□□□□□ -0.26
Vcpip1Q8CDG3 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC13.41□□□□□ -0.26
Vcpip1Q8CDG3 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC13.41□□□□□ -0.26
Vcpip1Q8CDG3 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Vcpip1Q8CDG3 Gm7029-201ENSMUST00000173226 450 ntBASIC13.41□□□□□ -0.26
Vcpip1Q8CDG3 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Vcpip1Q8CDG3 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC13.41□□□□□ -0.26
Vcpip1Q8CDG3 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms