Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Rnf17-202ENSMUST00000223627 2077 ntBASIC14.56□□□□□ -0.08
Vps53Q8CCB4 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC14.56□□□□□ -0.08
Vps53Q8CCB4 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vps53Q8CCB4 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vps53Q8CCB4 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vps53Q8CCB4 Gm7114-201ENSMUST00000190159 1789 ntBASIC14.56□□□□□ -0.08
Vps53Q8CCB4 Gm11222-201ENSMUST00000119005 738 ntBASIC14.56□□□□□ -0.08
Vps53Q8CCB4 Gm12997-201ENSMUST00000120207 640 ntBASIC14.56□□□□□ -0.08
Vps53Q8CCB4 Gm13813-201ENSMUST00000120998 787 ntBASIC14.56□□□□□ -0.08
Vps53Q8CCB4 Gm5363-201ENSMUST00000211927 938 ntBASIC14.56□□□□□ -0.08
Vps53Q8CCB4 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vps53Q8CCB4 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vps53Q8CCB4 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Vps53Q8CCB4 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
Vps53Q8CCB4 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vps53Q8CCB4 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vps53Q8CCB4 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC14.56□□□□□ -0.08
Vps53Q8CCB4 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Vps53Q8CCB4 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Vps53Q8CCB4 Gm6210-201ENSMUST00000204734 1942 ntBASIC14.56□□□□□ -0.08
Vps53Q8CCB4 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vps53Q8CCB4 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
Vps53Q8CCB4 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC14.56□□□□□ -0.08
Vps53Q8CCB4 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Vps53Q8CCB4 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vps53Q8CCB4 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vps53Q8CCB4 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vps53Q8CCB4 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vps53Q8CCB4 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Vps53Q8CCB4 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC14.55□□□□□ -0.08
Vps53Q8CCB4 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vps53Q8CCB4 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vps53Q8CCB4 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC14.55□□□□□ -0.08
Vps53Q8CCB4 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vps53Q8CCB4 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Vps53Q8CCB4 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vps53Q8CCB4 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Vps53Q8CCB4 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Vps53Q8CCB4 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC14.55□□□□□ -0.08
Vps53Q8CCB4 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC14.55□□□□□ -0.08
Vps53Q8CCB4 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Vps53Q8CCB4 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Vps53Q8CCB4 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vps53Q8CCB4 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC14.55□□□□□ -0.08
Vps53Q8CCB4 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC14.55□□□□□ -0.08
Vps53Q8CCB4 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC14.55□□□□□ -0.08
Vps53Q8CCB4 Gm18584-201ENSMUST00000203098 964 ntBASIC14.55□□□□□ -0.08
Vps53Q8CCB4 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Vps53Q8CCB4 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vps53Q8CCB4 Morn2-202ENSMUST00000227729 656 ntBASIC14.55□□□□□ -0.08
Vps53Q8CCB4 CT025533.2-201ENSMUST00000228715 1248 ntBASIC14.55□□□□□ -0.08
Vps53Q8CCB4 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vps53Q8CCB4 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vps53Q8CCB4 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Vps53Q8CCB4 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Vps53Q8CCB4 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC14.55□□□□□ -0.08
Vps53Q8CCB4 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vps53Q8CCB4 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vps53Q8CCB4 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vps53Q8CCB4 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Vps53Q8CCB4 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
Vps53Q8CCB4 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vps53Q8CCB4 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vps53Q8CCB4 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vps53Q8CCB4 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vps53Q8CCB4 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC14.54□□□□□ -0.08
Vps53Q8CCB4 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vps53Q8CCB4 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC14.54□□□□□ -0.08
Vps53Q8CCB4 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Vps53Q8CCB4 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Vps53Q8CCB4 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vps53Q8CCB4 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vps53Q8CCB4 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Vps53Q8CCB4 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vps53Q8CCB4 Gm11964-201ENSMUST00000120982 444 ntBASIC14.54□□□□□ -0.08
Vps53Q8CCB4 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC14.54□□□□□ -0.08
Vps53Q8CCB4 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
Vps53Q8CCB4 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC14.54□□□□□ -0.08
Vps53Q8CCB4 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC14.54□□□□□ -0.08
Vps53Q8CCB4 Gm5781-201ENSMUST00000219792 443 ntBASIC14.54□□□□□ -0.08
Vps53Q8CCB4 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vps53Q8CCB4 n-R5s77-201ENSMUST00000083757 119 ntBASIC14.54□□□□□ -0.08
Vps53Q8CCB4 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vps53Q8CCB4 AC113441.2-201ENSMUST00000221538 1468 ntBASIC14.54□□□□□ -0.08
Vps53Q8CCB4 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Vps53Q8CCB4 Gm26684-202ENSMUST00000228229 8257 ntBASIC14.54□□□□□ -0.08
Vps53Q8CCB4 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Vps53Q8CCB4 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC14.54□□□□□ -0.08
Vps53Q8CCB4 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Vps53Q8CCB4 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vps53Q8CCB4 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC14.54□□□□□ -0.08
Vps53Q8CCB4 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC14.54□□□□□ -0.08
Vps53Q8CCB4 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vps53Q8CCB4 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Vps53Q8CCB4 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vps53Q8CCB4 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vps53Q8CCB4 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Vps53Q8CCB4 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC14.53□□□□□ -0.08
Vps53Q8CCB4 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vps53Q8CCB4 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms