Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim9Q8C7M3 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim9Q8C7M3 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC13.76□□□□□ -0.21
Trim9Q8C7M3 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim9Q8C7M3 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trim9Q8C7M3 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim9Q8C7M3 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trim9Q8C7M3 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trim9Q8C7M3 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC13.76□□□□□ -0.21
Trim9Q8C7M3 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim9Q8C7M3 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Trim9Q8C7M3 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC13.76□□□□□ -0.21
Trim9Q8C7M3 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trim9Q8C7M3 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trim9Q8C7M3 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC13.76□□□□□ -0.21
Trim9Q8C7M3 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim9Q8C7M3 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC13.76□□□□□ -0.21
Trim9Q8C7M3 Gm8494-201ENSMUST00000178171 1233 ntBASIC13.76□□□□□ -0.21
Trim9Q8C7M3 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC13.76□□□□□ -0.21
Trim9Q8C7M3 Gm44882-201ENSMUST00000205702 802 ntBASIC13.76□□□□□ -0.21
Trim9Q8C7M3 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC13.76□□□□□ -0.21
Trim9Q8C7M3 AC140406.1-201ENSMUST00000226481 465 ntBASIC13.76□□□□□ -0.21
Trim9Q8C7M3 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim9Q8C7M3 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim9Q8C7M3 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trim9Q8C7M3 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim9Q8C7M3 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Trim9Q8C7M3 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim9Q8C7M3 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim9Q8C7M3 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Trim9Q8C7M3 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim9Q8C7M3 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim9Q8C7M3 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim9Q8C7M3 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Trim9Q8C7M3 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Trim9Q8C7M3 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim9Q8C7M3 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim9Q8C7M3 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim9Q8C7M3 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim9Q8C7M3 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim9Q8C7M3 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC13.75□□□□□ -0.21
Trim9Q8C7M3 Gm45743-201ENSMUST00000212701 2795 ntBASIC13.75□□□□□ -0.21
Trim9Q8C7M3 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim9Q8C7M3 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC13.75□□□□□ -0.21
Trim9Q8C7M3 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim9Q8C7M3 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC13.75□□□□□ -0.21
Trim9Q8C7M3 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC13.75□□□□□ -0.21
Trim9Q8C7M3 Gm4366-201ENSMUST00000201488 1342 ntBASIC13.75□□□□□ -0.21
Trim9Q8C7M3 Gm6203-201ENSMUST00000209575 1342 ntBASIC13.75□□□□□ -0.21
Trim9Q8C7M3 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim9Q8C7M3 Gm37324-201ENSMUST00000194500 4504 ntBASIC13.75□□□□□ -0.21
Trim9Q8C7M3 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Trim9Q8C7M3 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trim9Q8C7M3 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim9Q8C7M3 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trim9Q8C7M3 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim9Q8C7M3 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trim9Q8C7M3 Gm8062-201ENSMUST00000139696 444 ntBASIC13.75□□□□□ -0.21
Trim9Q8C7M3 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
Trim9Q8C7M3 Gm43118-201ENSMUST00000199149 775 ntBASIC13.75□□□□□ -0.21
Trim9Q8C7M3 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim9Q8C7M3 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Trim9Q8C7M3 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trim9Q8C7M3 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Trim9Q8C7M3 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim9Q8C7M3 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim9Q8C7M3 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim9Q8C7M3 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim9Q8C7M3 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim9Q8C7M3 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim9Q8C7M3 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim9Q8C7M3 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
Trim9Q8C7M3 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim9Q8C7M3 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Trim9Q8C7M3 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trim9Q8C7M3 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
Trim9Q8C7M3 Gm9361-201ENSMUST00000198695 1507 ntBASIC13.74□□□□□ -0.21
Trim9Q8C7M3 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC13.74□□□□□ -0.21
Trim9Q8C7M3 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim9Q8C7M3 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim9Q8C7M3 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC13.74□□□□□ -0.21
Trim9Q8C7M3 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC13.74□□□□□ -0.21
Trim9Q8C7M3 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Trim9Q8C7M3 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim9Q8C7M3 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim9Q8C7M3 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trim9Q8C7M3 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trim9Q8C7M3 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim9Q8C7M3 Gm14132-201ENSMUST00000117188 1719 ntBASIC13.74□□□□□ -0.21
Trim9Q8C7M3 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim9Q8C7M3 Gm12957-201ENSMUST00000117835 377 ntBASIC13.74□□□□□ -0.21
Trim9Q8C7M3 Gm11793-201ENSMUST00000120433 981 ntBASIC13.74□□□□□ -0.21
Trim9Q8C7M3 Gm14999-201ENSMUST00000121039 624 ntBASIC13.74□□□□□ -0.21
Trim9Q8C7M3 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trim9Q8C7M3 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trim9Q8C7M3 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Trim9Q8C7M3 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Trim9Q8C7M3 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC13.74□□□□□ -0.21
Trim9Q8C7M3 Gm18054-201ENSMUST00000207539 555 ntBASIC13.74□□□□□ -0.21
Trim9Q8C7M3 Gm45880-201ENSMUST00000213041 853 ntBASIC13.74□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms