Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Gm24136-201ENSMUST00000083374 165 ntBASIC15.92■□□□□ 0.14
Ccdc60Q8C4J0 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ccdc60Q8C4J0 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC15.92■□□□□ 0.14
Ccdc60Q8C4J0 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Ccdc60Q8C4J0 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ccdc60Q8C4J0 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Ccdc60Q8C4J0 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ccdc60Q8C4J0 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Ccdc60Q8C4J0 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ccdc60Q8C4J0 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ccdc60Q8C4J0 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Ccdc60Q8C4J0 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ccdc60Q8C4J0 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ccdc60Q8C4J0 Gm44260-201ENSMUST00000204946 2094 ntBASIC15.91■□□□□ 0.14
Ccdc60Q8C4J0 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ccdc60Q8C4J0 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ccdc60Q8C4J0 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC15.91■□□□□ 0.14
Ccdc60Q8C4J0 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Ccdc60Q8C4J0 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Ccdc60Q8C4J0 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ccdc60Q8C4J0 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC15.91■□□□□ 0.14
Ccdc60Q8C4J0 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC15.91■□□□□ 0.14
Ccdc60Q8C4J0 Gm23119-201ENSMUST00000158610 140 ntBASIC15.91■□□□□ 0.14
Ccdc60Q8C4J0 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC15.91■□□□□ 0.14
Ccdc60Q8C4J0 Gm9630-201ENSMUST00000178304 885 ntBASIC15.91■□□□□ 0.14
Ccdc60Q8C4J0 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC15.91■□□□□ 0.14
Ccdc60Q8C4J0 Gm43179-201ENSMUST00000198797 275 ntBASIC15.91■□□□□ 0.14
Ccdc60Q8C4J0 Gm30285-201ENSMUST00000214614 422 ntBASIC15.91■□□□□ 0.14
Ccdc60Q8C4J0 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Ccdc60Q8C4J0 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ccdc60Q8C4J0 Gm37437-201ENSMUST00000194451 1937 ntBASIC15.91■□□□□ 0.14
Ccdc60Q8C4J0 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ccdc60Q8C4J0 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ccdc60Q8C4J0 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ccdc60Q8C4J0 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ccdc60Q8C4J0 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Ccdc60Q8C4J0 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Ccdc60Q8C4J0 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Ccdc60Q8C4J0 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ccdc60Q8C4J0 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ccdc60Q8C4J0 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Ccdc60Q8C4J0 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC15.91■□□□□ 0.14
Ccdc60Q8C4J0 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ccdc60Q8C4J0 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Ccdc60Q8C4J0 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC15.9■□□□□ 0.14
Ccdc60Q8C4J0 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ccdc60Q8C4J0 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ccdc60Q8C4J0 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Ccdc60Q8C4J0 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC15.9■□□□□ 0.14
Ccdc60Q8C4J0 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Ccdc60Q8C4J0 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ccdc60Q8C4J0 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Ccdc60Q8C4J0 Gm5780-201ENSMUST00000217774 1834 ntBASIC15.9■□□□□ 0.14
Ccdc60Q8C4J0 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Ccdc60Q8C4J0 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ccdc60Q8C4J0 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC15.9■□□□□ 0.14
Ccdc60Q8C4J0 Gm14723-201ENSMUST00000118686 215 ntBASIC15.9■□□□□ 0.14
Ccdc60Q8C4J0 Gm9083-201ENSMUST00000120423 819 ntBASIC15.9■□□□□ 0.14
Ccdc60Q8C4J0 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC15.9■□□□□ 0.14
Ccdc60Q8C4J0 Gm38266-201ENSMUST00000194931 421 ntBASIC15.9■□□□□ 0.14
Ccdc60Q8C4J0 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC15.9■□□□□ 0.14
Ccdc60Q8C4J0 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Ccdc60Q8C4J0 AC113031.8-201ENSMUST00000227856 631 ntBASIC15.9■□□□□ 0.14
Ccdc60Q8C4J0 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC15.9■□□□□ 0.14
Ccdc60Q8C4J0 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Ccdc60Q8C4J0 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Ccdc60Q8C4J0 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ccdc60Q8C4J0 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ccdc60Q8C4J0 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Ccdc60Q8C4J0 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ccdc60Q8C4J0 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ccdc60Q8C4J0 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ccdc60Q8C4J0 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Ccdc60Q8C4J0 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ccdc60Q8C4J0 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Ccdc60Q8C4J0 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ccdc60Q8C4J0 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC15.9■□□□□ 0.14
Ccdc60Q8C4J0 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
Ccdc60Q8C4J0 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
Ccdc60Q8C4J0 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Ccdc60Q8C4J0 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ccdc60Q8C4J0 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Ccdc60Q8C4J0 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ccdc60Q8C4J0 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Ccdc60Q8C4J0 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
Ccdc60Q8C4J0 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ccdc60Q8C4J0 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Ccdc60Q8C4J0 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Ccdc60Q8C4J0 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
Ccdc60Q8C4J0 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Ccdc60Q8C4J0 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Ccdc60Q8C4J0 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC15.89■□□□□ 0.13
Ccdc60Q8C4J0 CT025533.2-201ENSMUST00000228715 1248 ntBASIC15.89■□□□□ 0.13
Ccdc60Q8C4J0 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ccdc60Q8C4J0 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Ccdc60Q8C4J0 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Ccdc60Q8C4J0 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Ccdc60Q8C4J0 Olfr582-201ENSMUST00000098212 960 ntBASIC15.89■□□□□ 0.13
Ccdc60Q8C4J0 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Ccdc60Q8C4J0 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms