Protein–RNA interactions for Protein: Q8C190

Vps9d1, VPS9 domain-containing protein 1, mousemouse

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps9d1Q8C190 Gm7067-201ENSMUST00000207698 1249 ntBASIC11.71□□□□□ -0.53
Vps9d1Q8C190 AC166051.1-201ENSMUST00000214313 210 ntBASIC11.71□□□□□ -0.53
Vps9d1Q8C190 AC153962.4-201ENSMUST00000217878 242 ntBASIC11.71□□□□□ -0.53
Vps9d1Q8C190 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC11.71□□□□□ -0.53
Vps9d1Q8C190 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Vps9d1Q8C190 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Vps9d1Q8C190 Gm9396-201ENSMUST00000076703 567 ntBASIC11.71□□□□□ -0.53
Vps9d1Q8C190 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Vps9d1Q8C190 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Vps9d1Q8C190 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Vps9d1Q8C190 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Vps9d1Q8C190 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Vps9d1Q8C190 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Vps9d1Q8C190 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Vps9d1Q8C190 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC11.71□□□□□ -0.54
Vps9d1Q8C190 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Vps9d1Q8C190 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Vps9d1Q8C190 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Vps9d1Q8C190 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Vps9d1Q8C190 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Vps9d1Q8C190 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC11.71□□□□□ -0.54
Vps9d1Q8C190 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Vps9d1Q8C190 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Vps9d1Q8C190 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Vps9d1Q8C190 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Vps9d1Q8C190 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Vps9d1Q8C190 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Vps9d1Q8C190 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Vps9d1Q8C190 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Vps9d1Q8C190 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Vps9d1Q8C190 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC11.7□□□□□ -0.54
Vps9d1Q8C190 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC11.7□□□□□ -0.54
Vps9d1Q8C190 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC11.7□□□□□ -0.54
Vps9d1Q8C190 Gm27486-201ENSMUST00000184923 80 ntBASIC11.7□□□□□ -0.54
Vps9d1Q8C190 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Vps9d1Q8C190 Gm19184-201ENSMUST00000196798 928 ntBASIC11.7□□□□□ -0.54
Vps9d1Q8C190 Gm8463-201ENSMUST00000208573 613 ntBASIC11.7□□□□□ -0.54
Vps9d1Q8C190 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC11.7□□□□□ -0.54
Vps9d1Q8C190 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC11.7□□□□□ -0.54
Vps9d1Q8C190 AC125350.2-201ENSMUST00000224737 727 ntBASIC11.7□□□□□ -0.54
Vps9d1Q8C190 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Vps9d1Q8C190 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Vps9d1Q8C190 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Vps9d1Q8C190 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Vps9d1Q8C190 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Vps9d1Q8C190 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Vps9d1Q8C190 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC11.7□□□□□ -0.54
Vps9d1Q8C190 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Vps9d1Q8C190 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Vps9d1Q8C190 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Vps9d1Q8C190 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC11.69□□□□□ -0.54
Vps9d1Q8C190 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Vps9d1Q8C190 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Vps9d1Q8C190 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Vps9d1Q8C190 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Vps9d1Q8C190 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Vps9d1Q8C190 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Vps9d1Q8C190 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Vps9d1Q8C190 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Vps9d1Q8C190 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Vps9d1Q8C190 CT009713.10-201ENSMUST00000225013 1986 ntBASIC11.69□□□□□ -0.54
Vps9d1Q8C190 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Vps9d1Q8C190 Gm9279-201ENSMUST00000223175 1606 ntBASIC11.69□□□□□ -0.54
Vps9d1Q8C190 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Vps9d1Q8C190 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Vps9d1Q8C190 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Vps9d1Q8C190 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC11.69□□□□□ -0.54
Vps9d1Q8C190 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC11.69□□□□□ -0.54
Vps9d1Q8C190 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Vps9d1Q8C190 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC11.69□□□□□ -0.54
Vps9d1Q8C190 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Vps9d1Q8C190 Gm7287-201ENSMUST00000205267 602 ntBASIC11.69□□□□□ -0.54
Vps9d1Q8C190 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Vps9d1Q8C190 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Vps9d1Q8C190 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Vps9d1Q8C190 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Vps9d1Q8C190 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Vps9d1Q8C190 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC11.69□□□□□ -0.54
Vps9d1Q8C190 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Vps9d1Q8C190 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Vps9d1Q8C190 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Vps9d1Q8C190 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Vps9d1Q8C190 AC157950.1-201ENSMUST00000217561 2168 ntBASIC11.69□□□□□ -0.54
Vps9d1Q8C190 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Vps9d1Q8C190 Gm2238-201ENSMUST00000192074 3669 ntBASIC11.69□□□□□ -0.54
Vps9d1Q8C190 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Vps9d1Q8C190 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Vps9d1Q8C190 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Vps9d1Q8C190 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Vps9d1Q8C190 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Vps9d1Q8C190 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Vps9d1Q8C190 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Vps9d1Q8C190 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Vps9d1Q8C190 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Vps9d1Q8C190 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Vps9d1Q8C190 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Vps9d1Q8C190 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC11.69□□□□□ -0.54
Vps9d1Q8C190 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Vps9d1Q8C190 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Vps9d1Q8C190 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms