Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sh3rf2Q8BZT2 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Sh3rf2Q8BZT2 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Sh3rf2Q8BZT2 Gm14644-201ENSMUST00000116671 647 ntBASIC12.67□□□□□ -0.38
Sh3rf2Q8BZT2 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC12.67□□□□□ -0.38
Sh3rf2Q8BZT2 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Sh3rf2Q8BZT2 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sh3rf2Q8BZT2 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Sh3rf2Q8BZT2 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC12.67□□□□□ -0.38
Sh3rf2Q8BZT2 Gm43138-201ENSMUST00000199123 708 ntBASIC12.67□□□□□ -0.38
Sh3rf2Q8BZT2 Gm19187-201ENSMUST00000206781 892 ntBASIC12.67□□□□□ -0.38
Sh3rf2Q8BZT2 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC12.67□□□□□ -0.38
Sh3rf2Q8BZT2 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC12.67□□□□□ -0.38
Sh3rf2Q8BZT2 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC12.67□□□□□ -0.38
Sh3rf2Q8BZT2 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sh3rf2Q8BZT2 Gm18626-201ENSMUST00000221512 1409 ntBASIC12.67□□□□□ -0.38
Sh3rf2Q8BZT2 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sh3rf2Q8BZT2 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sh3rf2Q8BZT2 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Sh3rf2Q8BZT2 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Sh3rf2Q8BZT2 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sh3rf2Q8BZT2 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sh3rf2Q8BZT2 Gm45342-201ENSMUST00000210903 1363 ntBASIC12.67□□□□□ -0.38
Sh3rf2Q8BZT2 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Sh3rf2Q8BZT2 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Sh3rf2Q8BZT2 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sh3rf2Q8BZT2 Gm43289-201ENSMUST00000200537 1475 ntBASIC12.66□□□□□ -0.38
Sh3rf2Q8BZT2 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sh3rf2Q8BZT2 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sh3rf2Q8BZT2 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sh3rf2Q8BZT2 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Sh3rf2Q8BZT2 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sh3rf2Q8BZT2 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sh3rf2Q8BZT2 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sh3rf2Q8BZT2 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sh3rf2Q8BZT2 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC12.66□□□□□ -0.38
Sh3rf2Q8BZT2 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sh3rf2Q8BZT2 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Sh3rf2Q8BZT2 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sh3rf2Q8BZT2 Gm17812-201ENSMUST00000204935 318 ntBASIC12.66□□□□□ -0.38
Sh3rf2Q8BZT2 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sh3rf2Q8BZT2 AC163667.3-201ENSMUST00000225774 222 ntBASIC12.66□□□□□ -0.38
Sh3rf2Q8BZT2 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Sh3rf2Q8BZT2 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Sh3rf2Q8BZT2 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sh3rf2Q8BZT2 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Sh3rf2Q8BZT2 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC12.66□□□□□ -0.38
Sh3rf2Q8BZT2 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.66□□□□□ -0.38
Sh3rf2Q8BZT2 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Sh3rf2Q8BZT2 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC12.66□□□□□ -0.38
Sh3rf2Q8BZT2 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sh3rf2Q8BZT2 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Sh3rf2Q8BZT2 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Sh3rf2Q8BZT2 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Sh3rf2Q8BZT2 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sh3rf2Q8BZT2 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sh3rf2Q8BZT2 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
Sh3rf2Q8BZT2 Gm9333-201ENSMUST00000205452 1323 ntBASIC12.65□□□□□ -0.38
Sh3rf2Q8BZT2 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sh3rf2Q8BZT2 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sh3rf2Q8BZT2 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sh3rf2Q8BZT2 CU062626.3-201ENSMUST00000225522 1411 ntBASIC12.65□□□□□ -0.38
Sh3rf2Q8BZT2 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sh3rf2Q8BZT2 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Sh3rf2Q8BZT2 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sh3rf2Q8BZT2 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Sh3rf2Q8BZT2 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sh3rf2Q8BZT2 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Sh3rf2Q8BZT2 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Sh3rf2Q8BZT2 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Sh3rf2Q8BZT2 Gm7002-201ENSMUST00000221386 2165 ntBASIC12.65□□□□□ -0.38
Sh3rf2Q8BZT2 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sh3rf2Q8BZT2 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC12.65□□□□□ -0.38
Sh3rf2Q8BZT2 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC12.65□□□□□ -0.38
Sh3rf2Q8BZT2 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sh3rf2Q8BZT2 Gm24749-201ENSMUST00000157838 343 ntBASIC12.65□□□□□ -0.38
Sh3rf2Q8BZT2 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Sh3rf2Q8BZT2 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC12.65□□□□□ -0.38
Sh3rf2Q8BZT2 Mir5120-201ENSMUST00000175020 78 ntBASIC12.65□□□□□ -0.38
Sh3rf2Q8BZT2 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Sh3rf2Q8BZT2 Gm9230-201ENSMUST00000188228 532 ntBASIC12.65□□□□□ -0.38
Sh3rf2Q8BZT2 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC12.65□□□□□ -0.38
Sh3rf2Q8BZT2 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC12.65□□□□□ -0.38
Sh3rf2Q8BZT2 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC12.65□□□□□ -0.38
Sh3rf2Q8BZT2 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC12.65□□□□□ -0.38
Sh3rf2Q8BZT2 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC12.65□□□□□ -0.38
Sh3rf2Q8BZT2 Gm9996-201ENSMUST00000070359 913 ntBASIC12.65□□□□□ -0.38
Sh3rf2Q8BZT2 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Sh3rf2Q8BZT2 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Sh3rf2Q8BZT2 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC12.65□□□□□ -0.38
Sh3rf2Q8BZT2 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sh3rf2Q8BZT2 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC12.65□□□□□ -0.38
Sh3rf2Q8BZT2 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Sh3rf2Q8BZT2 Gm13142-201ENSMUST00000117213 1453 ntBASIC12.65□□□□□ -0.38
Sh3rf2Q8BZT2 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Sh3rf2Q8BZT2 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sh3rf2Q8BZT2 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sh3rf2Q8BZT2 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sh3rf2Q8BZT2 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sh3rf2Q8BZT2 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms