Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
Nup54Q8BTS4 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Nup54Q8BTS4 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nup54Q8BTS4 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Nup54Q8BTS4 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Nup54Q8BTS4 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.78□□□□□ -0.36
Nup54Q8BTS4 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nup54Q8BTS4 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Nup54Q8BTS4 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Nup54Q8BTS4 Gm2420-201ENSMUST00000119864 2149 ntBASIC12.78□□□□□ -0.36
Nup54Q8BTS4 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nup54Q8BTS4 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC12.78□□□□□ -0.36
Nup54Q8BTS4 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Nup54Q8BTS4 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nup54Q8BTS4 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Nup54Q8BTS4 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Nup54Q8BTS4 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Nup54Q8BTS4 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC12.78□□□□□ -0.36
Nup54Q8BTS4 AC154222.2-201ENSMUST00000225848 607 ntBASIC12.78□□□□□ -0.36
Nup54Q8BTS4 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Nup54Q8BTS4 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nup54Q8BTS4 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nup54Q8BTS4 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nup54Q8BTS4 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Nup54Q8BTS4 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Nup54Q8BTS4 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nup54Q8BTS4 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Nup54Q8BTS4 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nup54Q8BTS4 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nup54Q8BTS4 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nup54Q8BTS4 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nup54Q8BTS4 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nup54Q8BTS4 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC12.78□□□□□ -0.36
Nup54Q8BTS4 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nup54Q8BTS4 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nup54Q8BTS4 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nup54Q8BTS4 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Nup54Q8BTS4 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nup54Q8BTS4 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nup54Q8BTS4 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nup54Q8BTS4 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Nup54Q8BTS4 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Nup54Q8BTS4 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Nup54Q8BTS4 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Nup54Q8BTS4 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.36
Nup54Q8BTS4 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Nup54Q8BTS4 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Nup54Q8BTS4 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Nup54Q8BTS4 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC12.77□□□□□ -0.36
Nup54Q8BTS4 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Nup54Q8BTS4 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Nup54Q8BTS4 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Nup54Q8BTS4 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Nup54Q8BTS4 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Nup54Q8BTS4 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Nup54Q8BTS4 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Nup54Q8BTS4 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Nup54Q8BTS4 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Nup54Q8BTS4 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nup54Q8BTS4 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nup54Q8BTS4 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.77□□□□□ -0.37
Nup54Q8BTS4 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Nup54Q8BTS4 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nup54Q8BTS4 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Nup54Q8BTS4 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC12.77□□□□□ -0.37
Nup54Q8BTS4 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC12.77□□□□□ -0.37
Nup54Q8BTS4 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Nup54Q8BTS4 Gm17376-201ENSMUST00000166016 84 ntBASIC12.77□□□□□ -0.37
Nup54Q8BTS4 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nup54Q8BTS4 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC12.77□□□□□ -0.37
Nup54Q8BTS4 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC12.77□□□□□ -0.37
Nup54Q8BTS4 Gm8885-201ENSMUST00000189382 598 ntBASIC12.77□□□□□ -0.37
Nup54Q8BTS4 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Nup54Q8BTS4 Ighv1-62-201ENSMUST00000193406 350 ntBASIC12.77□□□□□ -0.37
Nup54Q8BTS4 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nup54Q8BTS4 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC12.77□□□□□ -0.37
Nup54Q8BTS4 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Nup54Q8BTS4 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nup54Q8BTS4 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nup54Q8BTS4 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
Nup54Q8BTS4 Gm10312-201ENSMUST00000078515 489 ntBASIC12.77□□□□□ -0.37
Nup54Q8BTS4 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Nup54Q8BTS4 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nup54Q8BTS4 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
Nup54Q8BTS4 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nup54Q8BTS4 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC12.77□□□□□ -0.37
Nup54Q8BTS4 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Nup54Q8BTS4 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nup54Q8BTS4 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC12.77□□□□□ -0.37
Nup54Q8BTS4 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Nup54Q8BTS4 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Nup54Q8BTS4 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nup54Q8BTS4 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nup54Q8BTS4 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nup54Q8BTS4 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nup54Q8BTS4 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Nup54Q8BTS4 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nup54Q8BTS4 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12.76□□□□□ -0.37
Nup54Q8BTS4 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Nup54Q8BTS4 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms