Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Smco3Q8BQM7 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Smco3Q8BQM7 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Smco3Q8BQM7 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Smco3Q8BQM7 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Smco3Q8BQM7 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Smco3Q8BQM7 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Smco3Q8BQM7 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Smco3Q8BQM7 Acacb-202ENSMUST00000102582 8788 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Smco3Q8BQM7 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC10.28□□□□□ -0.76
Smco3Q8BQM7 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Smco3Q8BQM7 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Smco3Q8BQM7 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Smco3Q8BQM7 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Smco3Q8BQM7 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Smco3Q8BQM7 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Smco3Q8BQM7 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC10.28□□□□□ -0.76
Smco3Q8BQM7 Gm11400-201ENSMUST00000120853 1214 ntBASIC10.28□□□□□ -0.76
Smco3Q8BQM7 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Smco3Q8BQM7 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC10.28□□□□□ -0.76
Smco3Q8BQM7 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Smco3Q8BQM7 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC10.28□□□□□ -0.76
Smco3Q8BQM7 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC10.28□□□□□ -0.76
Smco3Q8BQM7 Gm27680-201ENSMUST00000184192 160 ntBASIC10.28□□□□□ -0.76
Smco3Q8BQM7 Gm37277-201ENSMUST00000194052 1111 ntBASIC10.28□□□□□ -0.76
Smco3Q8BQM7 Gm42550-201ENSMUST00000201553 960 ntBASIC10.28□□□□□ -0.76
Smco3Q8BQM7 Gm44124-201ENSMUST00000204159 472 ntBASIC10.28□□□□□ -0.76
Smco3Q8BQM7 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC10.28□□□□□ -0.76
Smco3Q8BQM7 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Smco3Q8BQM7 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Smco3Q8BQM7 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Smco3Q8BQM7 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Smco3Q8BQM7 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Smco3Q8BQM7 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Smco3Q8BQM7 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Smco3Q8BQM7 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Smco3Q8BQM7 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Smco3Q8BQM7 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Smco3Q8BQM7 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Smco3Q8BQM7 Atp9b-201ENSMUST00000091790 5357 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Smco3Q8BQM7 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Smco3Q8BQM7 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Smco3Q8BQM7 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Smco3Q8BQM7 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Smco3Q8BQM7 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Smco3Q8BQM7 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Smco3Q8BQM7 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Smco3Q8BQM7 Olfr1490-202ENSMUST00000213900 5165 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Smco3Q8BQM7 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Smco3Q8BQM7 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Smco3Q8BQM7 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Smco3Q8BQM7 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Smco3Q8BQM7 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC10.28□□□□□ -0.76
Smco3Q8BQM7 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Smco3Q8BQM7 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.76
Smco3Q8BQM7 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Smco3Q8BQM7 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Smco3Q8BQM7 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC10.27□□□□□ -0.76
Smco3Q8BQM7 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Smco3Q8BQM7 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Smco3Q8BQM7 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Smco3Q8BQM7 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Smco3Q8BQM7 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Smco3Q8BQM7 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Smco3Q8BQM7 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Smco3Q8BQM7 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Smco3Q8BQM7 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Smco3Q8BQM7 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Smco3Q8BQM7 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Smco3Q8BQM7 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Smco3Q8BQM7 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Smco3Q8BQM7 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Smco3Q8BQM7 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Smco3Q8BQM7 Arid2-201ENSMUST00000096250 8507 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Smco3Q8BQM7 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC10.27□□□□□ -0.77
Smco3Q8BQM7 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC10.27□□□□□ -0.77
Smco3Q8BQM7 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC10.27□□□□□ -0.77
Smco3Q8BQM7 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Smco3Q8BQM7 Gm27321-201ENSMUST00000185021 205 ntBASIC10.27□□□□□ -0.77
Smco3Q8BQM7 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC10.27□□□□□ -0.77
Smco3Q8BQM7 Gm43094-201ENSMUST00000196549 921 ntBASIC10.27□□□□□ -0.77
Smco3Q8BQM7 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC10.27□□□□□ -0.77
Smco3Q8BQM7 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC10.27□□□□□ -0.77
Smco3Q8BQM7 CT943659.1-201ENSMUST00000215459 326 ntBASIC10.27□□□□□ -0.77
Smco3Q8BQM7 AC139580.1-202ENSMUST00000223574 928 ntBASIC10.27□□□□□ -0.77
Smco3Q8BQM7 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Smco3Q8BQM7 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC10.27□□□□□ -0.77
Smco3Q8BQM7 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Smco3Q8BQM7 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Smco3Q8BQM7 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC10.27□□□□□ -0.77
Smco3Q8BQM7 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Smco3Q8BQM7 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Smco3Q8BQM7 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Smco3Q8BQM7 Gm5053-201ENSMUST00000208361 1678 ntBASIC10.27□□□□□ -0.77
Smco3Q8BQM7 Gm10040-201ENSMUST00000080726 1662 ntBASIC10.27□□□□□ -0.77
Smco3Q8BQM7 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Smco3Q8BQM7 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Smco3Q8BQM7 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Smco3Q8BQM7 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC10.27□□□□□ -0.77
Smco3Q8BQM7 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms